Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04581 and RBAM_028250
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:02
# Commandline: needle
# -asequence pep-align/BSNT_04581___uppP.1.9828.seq
# -bsequence pep-align/RBAM_028250___yubB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04581___uppP-RBAM_028250___yubB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04581___uppP-RBAM_028250___yubB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04581___uppP
# 2: RBAM_028250___yubB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 276
# Identity: 224/276 (81.2%)
# Similarity: 256/276 (92.8%)
# Gaps: 0/276 ( 0.0%)
# Score: 1174.0
#
#
#=======================================
BSNT_04581___ 1 MTLWELFVAAILGIVEGLTEYAPVSSTGHMIIVDDIWLKSSNLMSEEAAN 50
|||||:|.||:|||||||||||||||||||||.|||||||.:||:.||||
RBAM_028250__ 1 MTLWEMFTAAVLGIVEGLTEYAPVSSTGHMIIADDIWLKSGSLMNPEAAN 50
BSNT_04581___ 51 SFKVVIQLGSILAVAIVFKDRILNLLGLKKNITSDQEQGHKLSIAQIAVG 100
|||||||||||||||||||||||:|||||||:|.||::|::|:|||||||
RBAM_028250__ 51 SFKVVIQLGSILAVAIVFKDRILHLLGLKKNVTRDQQKGYRLTIAQIAVG 100
BSNT_04581___ 101 LVPAAVLGFLFEDYIDEYLFSVKTVAIGLIAGAILMLFADWVNKRKTATD 150
|||||||||||||:||.|||||:|||.||||||:|||.|||:||||...|
RBAM_028250__ 101 LVPAAVLGFLFEDFIDRYLFSVRTVAYGLIAGAVLMLIADWINKRKETID 150
BSNT_04581___ 151 TLDRISYKQAIAVGLFQCLALWPGFSRSGSTISGGVILGLNHRAAADFTF 200
|:|||:||||..||||||||||||||||||||:||||:||||||||||||
RBAM_028250__ 151 TVDRITYKQAFCVGLFQCLALWPGFSRSGSTIAGGVIVGLNHRAAADFTF 200
BSNT_04581___ 201 IMAMPIMMGASFLSLVKHWDSLSSDLMPFFIVGFICAFVVALFVVRFFLR 250
|||:|||.|||.|.|||:|.|||.|::|||:|||||||||||.||:||||
RBAM_028250__ 201 IMAIPIMAGASLLKLVKYWSSLSYDMIPFFLVGFICAFVVALLVVKFFLR 250
BSNT_04581___ 251 LINKIKLVPFAIYRIILGVILLLIMM 276
|||:||||||||||:|||:||::::.
RBAM_028250__ 251 LINRIKLVPFAIYRVILGIILIMLVR 276
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