Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04561 and RBAM_028130

See DNA alignment / Visit BSNT_04561 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:00
# Commandline: needle
#    -asequence pep-align/BSNT_04561___yuaE.1.9828.seq
#    -bsequence pep-align/RBAM_028130___yuaE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04561___yuaE-RBAM_028130___yuaE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04561___yuaE-RBAM_028130___yuaE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04561___yuaE
# 2: RBAM_028130___yuaE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 163
# Identity:     112/163 (68.7%)
# Similarity:   137/163 (84.0%)
# Gaps:           1/163 ( 0.6%)
# Score: 609.0
# 
#
#=======================================

BSNT_04561___      1 MMSIFNEARLETWNELKGLSDEKLNQKPSAEEWSIREVLDHLKKIDMTAQ     50
                      ||||||||.:.|.||||||||:.|:||:|:|||:|||||||||||.|||
RBAM_028130__      1 -MSIFNEARQQIWEELKGLSDEEFNRKPAADEWSVREVLDHLKKIDETAQ     49

BSNT_04561___     51 KMLKERVKDAPIKEIEEKSLEVAQDRNNKRKAPSHLEPAHDFISGSQMKR    100
                     .:|.::.||||:||||||.:|..:||.:||.|||||||..:.||..:.|:
RBAM_028130__     50 TLLSKQAKDAPLKEIEEKPMEFIEDRTDKRPAPSHLEPEQNRISVIEAKQ     99

BSNT_04561___    101 ELDVVREQLTAAIASLKEEDFERVLPHPVFQELTVRQWIDFIGHHEKRHL    150
                     |||..|:||||.|:||.||||||||||||||||.:||||||||||||||:
RBAM_028130__    100 ELDTARQQLTAVISSLNEEDFERVLPHPVFQELAIRQWIDFIGHHEKRHI    149

BSNT_04561___    151 SQMKEIKEKIERA    163
                     :|:||||:||::.
RBAM_028130__    150 NQIKEIKQKIKKV    162


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.