Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04560 and RBAM_028120
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:00
# Commandline: needle
# -asequence pep-align/BSNT_04560___yuaF.1.9828.seq
# -bsequence pep-align/RBAM_028120___yuaF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04560___yuaF-RBAM_028120___yuaF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04560___yuaF-RBAM_028120___yuaF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04560___yuaF
# 2: RBAM_028120___yuaF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 193
# Identity: 126/193 (65.3%)
# Similarity: 150/193 (77.7%)
# Gaps: 19/193 ( 9.8%)
# Score: 640.5
#
#
#=======================================
BSNT_04560___ 1 MVTAAVHQCIDEERMRKLELFGVPIQTIYLYTLIIAGSLTLLFLFFGDVF 50
:::|.:|::|:|||||||:||||||.|||.|||
RBAM_028120__ 1 -----------------MDIFHLPLETVYLYTLIISGSLTLLILFFQDVF 33
BSNT_04560___ 51 AGLSEGIP--FLNPTLVLSFFTCFSAGGYIGELVLPLSSLLIALLSCILS 98
.||||.|| ||||.|:|||.|.|||.|||||:..||||.:|||||.:||
RBAM_028120__ 34 HGLSEAIPVSFLNPALILSFLTIFSASGYIGEIAAPLSSSVIALLSFVLS 83
BSNT_04560___ 99 IMLVVLLHIFVLVPLSSAEESLAYREDDLRGRLGKVITAVPVDGFGEVVI 148
::||.|||.|||||||||||||||||.||:||:|:|||:||.||:|||:|
RBAM_028120__ 84 VLLVSLLHFFVLVPLSSAEESLAYRETDLKGRVGRVITSVPKDGYGEVII 133
BSNT_04560___ 149 EGIGGTISKSAVSFDNQQISYGTTVLVVDINNGVLSVTPHEPI 191
|||||.|||||||||.:||.|||.|||:|:.:|||.|||||.|
RBAM_028120__ 134 EGIGGAISKSAVSFDQEQIKYGTAVLVIDVKDGVLFVTPHELI 176
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