Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04557 and RBAM_028100
See
DNA alignment /
Visit
BSNT_04557 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:00
# Commandline: needle
# -asequence pep-align/BSNT_04557___yuaJ.1.9828.seq
# -bsequence pep-align/RBAM_028100___yuaJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04557___yuaJ-RBAM_028100___yuaJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04557___yuaJ-RBAM_028100___yuaJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04557___yuaJ
# 2: RBAM_028100___yuaJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 193
# Identity: 150/193 (77.7%)
# Similarity: 168/193 (87.0%)
# Gaps: 1/193 ( 0.5%)
# Score: 765.0
#
#
#=======================================
BSNT_04557___ 1 MNQSKQLVRLIEIAIMTAAAVILDIVSGMFLSMPQGGSVSIMMIPIFLIS 50
||.|.:|||||||||||.|||||||||||||.||||||||||||||||||
RBAM_028100__ 1 MNHSTRLVRLIEIAIMTGAAVILDIVSGMFLRMPQGGSVSIMMIPIFLIS 50
BSNT_04557___ 51 FRWGVKAGLTTGLLTGLVQIAIGNLFAQHPVQLLLDYIVAFAAIGISGCF 100
||||||||||||.|||:|||||||||.||||||.||||.|||.:|.||.|
RBAM_028100__ 51 FRWGVKAGLTTGFLTGIVQIAIGNLFLQHPVQLFLDYIAAFAVLGFSGLF 100
BSNT_04557___ 101 ASSVRKAAVSKTKGKLIVSVVSAVFIGSLLRYAAHVISGAVFFGSFAPKG 150
||.||::|::|.:|.|.:.|:..|||||:|||||||:||||||||:||||
RBAM_028100__ 101 ASGVRESALNKKRGALTMYVIGGVFIGSVLRYAAHVVSGAVFFGSYAPKG 150
BSNT_04557___ 151 TPVWIYSLTYNATYMVPSFIICAIVLCLLFMTAPRLLKSDKA- 192
|||||||..||||||:||||:.||||.||||||||||::.:.
RBAM_028100__ 151 TPVWIYSSVYNATYMIPSFILSAIVLILLFMTAPRLLEAKRTN 193
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.