Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04488 and RBAM_027820

See DNA alignment / Visit BSNT_04488 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:59
# Commandline: needle
#    -asequence pep-align/BSNT_04488___yteA.1.9828.seq
#    -bsequence pep-align/RBAM_027820___yteA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04488___yteA-RBAM_027820___yteA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04488___yteA-RBAM_027820___yteA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04488___yteA
# 2: RBAM_027820___yteA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity:     193/239 (80.8%)
# Similarity:   215/239 (90.0%)
# Gaps:           0/239 ( 0.0%)
# Score: 1039.0
# 
#
#=======================================

BSNT_04488___      1 MLTKEQLQHLKNELEQTKKDILNRFKDNDHFQLNSAFPYDSWGELSAYDN     50
                     |||.||:.|||.|||:.:.|||:|||:||.|||...|||.|.||||:|||
RBAM_027820__      1 MLTNEQITHLKKELEEARHDILSRFKENDQFQLADEFPYQSSGELSSYDN     50

BSNT_04488___     51 HPGDQATELYEREKDIALDLHEREHLRDIEHSLKAIENGTYGICEVSGKE    100
                     |||||||||||||||:||..|||||||||::|||.|||||||.||||||:
RBAM_027820__     51 HPGDQATELYEREKDLALLDHEREHLRDIDYSLKQIENGTYGTCEVSGKD    100

BSNT_04488___    101 IPFERLEALPTATTLAEYSSQDVVSKDRPIEEETPFGQFEFDDDEEIRAP    150
                     ||::||||||||||||||||||.||||||||||||||||||||||.|||.
RBAM_027820__    101 IPYDRLEALPTATTLAEYSSQDAVSKDRPIEEETPFGQFEFDDDESIRAT    150

BSNT_04488___    151 YDSEDSYQDVEKYGNSQTPQDMENPPLSYDDMTMNAEENIGNTESYENFI    200
                     |||||:|||||:||||:||||:|:|||||.|||||:|||||..|.|||||
RBAM_027820__    151 YDSEDAYQDVEEYGNSETPQDLEDPPLSYGDMTMNSEENIGYAEDYENFI    200

BSNT_04488___    201 ATDITGKEITVYQSRAHERYEEELDEEGIMTTFGDLHAD    239
                     |||||||.|:||.|:|||:||:|||||||||||||||||
RBAM_027820__    201 ATDITGKNISVYPSKAHEKYEQELDEEGIMTTFGDLHAD    239


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