Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04488 and RBAM_027820
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:59
# Commandline: needle
# -asequence dna-align/BSNT_04488___yteA.1.9828.seq
# -bsequence dna-align/RBAM_027820___yteA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04488___yteA-RBAM_027820___yteA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04488___yteA-RBAM_027820___yteA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04488___yteA
# 2: RBAM_027820___yteA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 725
# Identity: 553/725 (76.3%)
# Similarity: 553/725 (76.3%)
# Gaps: 10/725 ( 1.4%)
# Score: 2055.0
#
#
#=======================================
BSNT_04488___ 1 TTGCTTACGAAAGAACAGCTTCA-GCATTTAAAAAATGAACTGGAACAAA 49
.|||||||.||.|||||| .||| .||.||||||||.|||.|||||.||.
RBAM_027820__ 1 GTGCTTACAAACGAACAG-ATCACACACTTAAAAAAAGAATTGGAAGAAG 49
BSNT_04488___ 50 CGAAAAAAGATATCTTAAACCGTTTCAAAGACAATGATCATTTTCAGCTT 99
|.|.|.|.|||||.||||.|||.||.|||||.||||||||.|||||| ||
RBAM_027820__ 50 CCAGACATGATATTTTAAGCCGCTTTAAAGAAAATGATCAATTTCAG-TT 98
BSNT_04488___ 100 AACTCA-GCATTTCCTTATGATTCGTGGGGTGAGCTTTCGGCATACGACA 148
|.||.| |.|||.||.|||.|.||.|..||.||..|.||..|.||.||||
RBAM_027820__ 99 AGCTGATGAATTCCCGTATCAGTCATCCGGCGAATTGTCTTCCTATGACA 148
BSNT_04488___ 149 ACCATCCCGGCGATCAGGCGACAGAACTTTACGAGCGTGAGAAAGACATC 198
|.||||||||||||||||||||.|||.|.||||||||.||.||||||.|.
RBAM_027820__ 149 ATCATCCCGGCGATCAGGCGACCGAATTATACGAGCGGGAAAAAGACCTG 198
BSNT_04488___ 199 GCT---CTAGACTTGCATGAGCGAGAGCACCTTCGGGACATTGAGCATTC 245
||| ||.||| |||||.||.|||||||||||.||||||||..|.||
RBAM_027820__ 199 GCTCTGCTCGAC---CATGAACGGGAGCACCTTCGCGACATTGATTACTC 245
BSNT_04488___ 246 ATTGAAGGCGATAGAAAACGGTACGTATGGCATTTGTGAAGTCAGCGGAA 295
..||||....||.||||||||.||.||.||||..||||||||||||||.|
RBAM_027820__ 246 TCTGAAACAAATTGAAAACGGCACATACGGCACATGTGAAGTCAGCGGCA 295
BSNT_04488___ 296 AGGAAATCCCGTTCGAACGACTTGAAGCGCTTCCGACTGCCACAACCCTC 345
||||.||.||.|..||..||||.|||||.||.|||||.||.||.||..|.
RBAM_027820__ 296 AGGACATTCCTTATGACAGACTCGAAGCTCTGCCGACGGCTACGACATTG 345
BSNT_04488___ 346 GCGGAGTATTCGTCACAGGACGTGGTTTCCAAGGACCGTCCGATTGAAGA 395
|||||.|||||.||.|||||.|..||||||||.|||.|.||||||||.||
RBAM_027820__ 346 GCGGAATATTCCTCGCAGGATGCCGTTTCCAAAGACAGGCCGATTGAGGA 395
BSNT_04488___ 396 AGAAACACCATTCGGGCAATTTGAATTTGATGATGATGAAGAAATCAGAG 445
.||||||||.|||||.||.|||||||||||||||||||||..||||.|.|
RBAM_027820__ 396 GGAAACACCGTTCGGACAGTTTGAATTTGATGATGATGAATCAATCCGGG 445
BSNT_04488___ 446 CGCCATATGACAGTGAGGATTCCTATCAGGATGTCGAAAAATATGGTAAC 495
||.|.||.||.|||||.|||.|.|||||||||||.||..||||.||.|||
RBAM_027820__ 446 CGACTTACGATAGTGAAGATGCTTATCAGGATGTTGAGGAATACGGAAAC 495
BSNT_04488___ 496 TCACAAACGCCGCAGGATATGGAAAACCCTCCGCTAAGCTATGACGATAT 545
|||.|||||||.||||||.|.||..|.||||||||.|||||||..|||||
RBAM_027820__ 496 TCAGAAACGCCTCAGGATTTAGAGGATCCTCCGCTCAGCTATGGGGATAT 545
BSNT_04488___ 546 GACGATGAATGCCGAAGAGAATATCGGCAATACGGAGTCTTACGAAAATT 595
|||.|||||..|.|||||.||.||||||.||.|.|||..|||.|||||.|
RBAM_027820__ 546 GACAATGAACTCAGAAGAAAACATCGGCTATGCTGAGGATTATGAAAACT 595
BSNT_04488___ 596 TCATCGCTACAGATATCACTGGAAAAGAAATTACCGTTTATCAAAGCAGA 645
|.|||||.||||||||.||.||||||.|.|||.||||.||||.|||||.|
RBAM_027820__ 596 TTATCGCGACAGATATTACCGGAAAAAACATTTCCGTGTATCCAAGCAAA 645
BSNT_04488___ 646 GCCCATGAGCGCTATGAAGAAGAACTTGACGAAGAGGGAATCATGACCAC 695
||.||.||....||||||.|.|||||.||||||||.|||||.|||||.||
RBAM_027820__ 646 GCACACGAAAAATATGAACAGGAACTGGACGAAGAAGGAATTATGACGAC 695
BSNT_04488___ 696 ATTCGGCGATCTCCACGCTGATTGA 720
.||.||||||||.||.|||||||.|
RBAM_027820__ 696 CTTTGGCGATCTTCATGCTGATTAA 720
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