Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04486 and RBAM_027810
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:59
# Commandline: needle
# -asequence pep-align/BSNT_04486___menF.1.9828.seq
# -bsequence pep-align/RBAM_027810___menF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04486___menF-RBAM_027810___menF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04486___menF-RBAM_027810___menF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04486___menF
# 2: RBAM_027810___menF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 486
# Identity: 334/486 (68.7%)
# Similarity: 399/486 (82.1%)
# Gaps: 15/486 ( 3.1%)
# Score: 1772.0
#
#
#=======================================
BSNT_04486___ 1 MYGIKSILRIMEECLMVTTVQRTFRKEVLHALHKAKEVNHAVLISYSRQI 50
||||||.|||:|..|||||||:||||||:||||:|
RBAM_027810__ 1 ---------------MVTTVQHTFREEADHALHKAKQVNHAVLLSYSRRI 35
BSNT_04486___ 51 ESLDPLSFFNYGAKKYTGNRFFWSDPESELTIVGLGKEAVFQTNQKNSER 100
.||||||||..|||||.|.|||||:|.|||||||||.||:||:|:||.:|
RBAM_027810__ 36 ASLDPLSFFKDGAKKYKGKRFFWSEPGSELTIVGLGTEALFQSNEKNGKR 85
BSNT_04486___ 101 YREVFEQWERFKKTAFHIYEEEKLQHSAVGPVLFGGFSFDPCEERGSQWD 150
|.:|||||||||||||||:|||:..|:||||||||||||:|.||||.:|:
RBAM_027810__ 86 YHDVFEQWERFKKTAFHIHEEEEAAHTAVGPVLFGGFSFNPAEERGDEWN 135
BSNT_04486___ 151 HFSEGDFFVPALMLTMTAEGPFLTVNRWVSGGEDAEAVLEGLKAFAAEFM 200
.|.||.||:|:||||.||:|.:||||:|.:.|..||..|:.||:|:..|.
RBAM_027810__ 136 GFEEGLFFIPSLMLTKTADGDYLTVNQWAADGNLAEDTLKRLKSFSEAFS 185
BSNT_04486___ 201 VPDFKQEDQAVIAAAEELDKDDWLKAIETATSQIKEKQYDKVVLARELLL 250
|...:.|:..|:..|||||.::||:||:|||:.:|..||||||||||::|
RBAM_027810__ 186 VSSIEYEEYPVLTKAEELDVENWLEAIKTATNGMKANQYDKVVLAREVVL 235
BSNT_04486___ 251 TFDGPIQIEPVLKTLLDDQQTSYVFAIEQEGKTFVGASPERLIKRDGGTV 300
::||||..|.|::.||.||.|||||||||..|.|||||||||||:.|..|
RBAM_027810__ 236 SYDGPIPAESVVRKLLTDQTTSYVFAIEQGDKCFVGASPERLIKKSGKDV 285
BSNT_04486___ 301 MSSCLAGSIKRGVNEEDDRRIGLELLNDEKNLLEHDIVVGMIHNAFVSSC 350
||:|||||||||.|:::|.|:|.|||:|||||.|||.||.|||::|:|||
RBAM_027810__ 286 MSTCLAGSIKRGENQQEDERLGKELLHDEKNLAEHDFVVQMIHDSFLSSC 335
BSNT_04486___ 351 SEVEKPDGPVLYKTKSVQHLFTPIVGQLRESASIFDLIEKLHPTPALGGA 400
|:|:||.||.||||||||||:|||.|.|:.|||:|||||||||||||||:
RBAM_027810__ 336 SDVKKPAGPQLYKTKSVQHLYTPITGHLKTSASLFDLIEKLHPTPALGGS 385
BSNT_04486___ 401 PQEKAVDVIREIEPMSRGWYAAPIGWIDSQDNGEFAVAIRSGLIEGSTAR 450
||:|||:||.:||||:||||||||||:|.::||||.||||||||||.:||
RBAM_027810__ 386 PQQKAVEVIADIEPMTRGWYAAPIGWMDGRENGEFVVAIRSGLIEGKSAR 435
BSNT_04486___ 451 LFAGCGIVEDSEPISEYEETQIKLKPMISALGGERR 486
|||||||||||:|.|||||||||||||||||||||.
RBAM_027810__ 436 LFAGCGIVEDSDPQSEYEETQIKLKPMISALGGERL 471
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