Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04468 and E2

See DNA alignment / Visit BSNT_04468 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:58
# Commandline: needle
#    -asequence pep-align/BSNT_04468___rpmE2.1.9828.seq
#    -bsequence pep-align/RBAM_027710___rpmE2.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04468___rpmE2-RBAM_027710___rpmE2.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04468___rpmE2-RBAM_027710___rpmE2.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04468___rpmE2
# 2: RBAM_027710___rpmE2
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 82
# Identity:      71/82 (86.6%)
# Similarity:    75/82 (91.5%)
# Gaps:           0/82 ( 0.0%)
# Score: 386.0
# 
#
#=======================================

BSNT_04468___      1 MKEGIHPKNHKVIFQDVNSGYRFLSTSTKTSNETAEWEDGNTYPVIKVEV     50
                     ||:.|||.||:||||||||||||||.|||.|.||||||||.|||:|||||
RBAM_027710__      1 MKKDIHPDNHQVIFQDVNSGYRFLSHSTKKSEETAEWEDGKTYPLIKVEV     50

BSNT_04468___     51 SSDTHPFYTGRQKFNEKGGRVEQFKKRYNMGK     82
                     ||||||||||||||||||||||||.|:|||||
RBAM_027710__     51 SSDTHPFYTGRQKFNEKGGRVEQFNKKYNMGK     82


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