Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04468 and E2
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:58
# Commandline: needle
# -asequence dna-align/BSNT_04468___rpmE2.1.9828.seq
# -bsequence dna-align/RBAM_027710___rpmE2.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04468___rpmE2-RBAM_027710___rpmE2.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04468___rpmE2-RBAM_027710___rpmE2.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04468___rpmE2
# 2: RBAM_027710___rpmE2
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 249
# Identity: 204/249 (81.9%)
# Similarity: 204/249 (81.9%)
# Gaps: 0/249 ( 0.0%)
# Score: 840.0
#
#
#=======================================
BSNT_04468___ 1 ATGAAAGAAGGAATTCATCCAAAGAACCACAAAGTGATATTTCAGGATGT 50
||||||.|||..||.|||||..|.|||||..|||||||.|||||.|||||
RBAM_027710__ 1 ATGAAAAAAGATATACATCCGGATAACCATCAAGTGATTTTTCAAGATGT 50
BSNT_04468___ 51 CAACAGCGGCTACCGTTTTCTCAGCACCTCTACGAAAACATCTAATGAAA 100
.|||||||||||.||.|||.|.|||...||||||||||.|||..|.||||
RBAM_027710__ 51 GAACAGCGGCTATCGCTTTTTAAGCCATTCTACGAAAAAATCAGAGGAAA 100
BSNT_04468___ 101 CAGCAGAGTGGGAAGACGGAAACACATATCCTGTCATTAAAGTAGAGGTA 150
|.||||||||||||||||||||.|||||.||..|.||||||||||||||.
RBAM_027710__ 101 CGGCAGAGTGGGAAGACGGAAAGACATACCCGCTGATTAAAGTAGAGGTC 150
BSNT_04468___ 151 AGTTCTGACACGCATCCGTTTTATACAGGCCGCCAGAAATTCAATGAAAA 200
||.||.||.||||||||||||||||||||||||||.||||||||.|||||
RBAM_027710__ 151 AGCTCAGATACGCATCCGTTTTATACAGGCCGCCAAAAATTCAACGAAAA 200
BSNT_04468___ 201 AGGCGGACGAGTTGAGCAGTTCAAAAAACGCTATAACATGGGGAAATAA 249
||||||..||||.||.||||||||.|||...||.||.||||||||||||
RBAM_027710__ 201 AGGCGGGAGAGTCGAACAGTTCAACAAAAAATACAATATGGGGAAATAA 249
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