Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04467 and RBAM_027700
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:58
# Commandline: needle
# -asequence pep-align/BSNT_04467___ytiB.1.9828.seq
# -bsequence pep-align/RBAM_027700___ytiB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04467___ytiB-RBAM_027700___ytiB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04467___ytiB-RBAM_027700___ytiB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04467___ytiB
# 2: RBAM_027700___ytiB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 189
# Identity: 155/189 (82.0%)
# Similarity: 176/189 (93.1%)
# Gaps: 2/189 ( 1.1%)
# Score: 837.0
#
#
#=======================================
BSNT_04467___ 1 MSLLNDILEFNKTFTEQREYEKYQTSKFPDKKMAILSCMDTRLVELLPHA 50
|||||||::||:.||:.::|||||||||||||||||||||||||||||||
RBAM_027700__ 1 MSLLNDIMQFNEQFTKNKDYEKYQTSKFPDKKMAILSCMDTRLVELLPHA 50
BSNT_04467___ 51 MNLRNGDVKIIKSAGALVTHPFGSIMRSLLVAVYELNADEVCVIGHHDCG 100
||:|||||||||||||||.|||||||||||||||||||||||||||||||
RBAM_027700__ 51 MNMRNGDVKIIKSAGALVAHPFGSIMRSLLVAVYELNADEVCVIGHHDCG 100
BSNT_04467___ 101 MSKISSKSMLEKIKARGIPEERIETIKYSGVDFDQWFKSFDSVEASVKDS 150
||||:|:.||:||..||||:|||:.:|:||||.|||.||||||||||.||
RBAM_027700__ 101 MSKINSEDMLDKIIDRGIPKERIDMLKHSGVDLDQWLKSFDSVEASVTDS 150
BSNT_04467___ 151 VDVIKHHPLFPENVPVHGLVIDPKTGKLDLIVNGYNN-- 187
|:|||||||||:|||||||||||:||||||:::||.:
RBAM_027700__ 151 VNVIKHHPLFPDNVPVHGLVIDPETGKLDLVIDGYQHMD 189
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