Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04465 and RBAM_027680

See DNA alignment / Visit BSNT_04465 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:58
# Commandline: needle
#    -asequence pep-align/BSNT_04465___luxS.1.9828.seq
#    -bsequence pep-align/RBAM_027680___luxS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04465___luxS-RBAM_027680___luxS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04465___luxS-RBAM_027680___luxS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04465___luxS
# 2: RBAM_027680___luxS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 157
# Identity:     147/157 (93.6%)
# Similarity:   155/157 (98.7%)
# Gaps:           0/157 ( 0.0%)
# Score: 796.0
# 
#
#=======================================

BSNT_04465___      1 MPSVESFELDHNAVVAPYVRHCGVHKVGTDGVVNKFDIRFCQPNKQAMKP     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_027680__      1 MPSVESFELDHNAVVAPYVRHCGVHKVGTDGVVNKFDIRFCQPNKQAMKP     50

BSNT_04465___     51 DTIHTLEHLLAFTIRSHAEKYDHFDIIDISPMGCQTGYYLVVSGEPTSAE    100
                     |||||||||||||||:|:|||||||||||||||||||||||||||||:.|
RBAM_027680__     51 DTIHTLEHLLAFTIRTHSEKYDHFDIIDISPMGCQTGYYLVVSGEPTAEE    100

BSNT_04465___    101 IVDLLEDTMKEAVEITEIPAANEKQCGQAKLHDLEGAKRLMRFWLSQDKE    150
                     |||||:.|:|||::||||||||||||||||||||||||||||||||||||
RBAM_027680__    101 IVDLLDATLKEAIDITEIPAANEKQCGQAKLHDLEGAKRLMRFWLSQDKE    150

BSNT_04465___    151 ELLKVFG    157
                     :||||||
RBAM_027680__    151 DLLKVFG    157


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