Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04460 and RBAM_027650

See DNA alignment / Visit BSNT_04460 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:57
# Commandline: needle
#    -asequence pep-align/BSNT_04460___ytkC.1.9828.seq
#    -bsequence pep-align/RBAM_027650___ytkC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04460___ytkC-RBAM_027650___ytkC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04460___ytkC-RBAM_027650___ytkC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04460___ytkC
# 2: RBAM_027650___ytkC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 138
# Identity:     109/138 (79.0%)
# Similarity:   129/138 (93.5%)
# Gaps:           4/138 ( 2.9%)
# Score: 562.0
# 
#
#=======================================

BSNT_04460___      1 ----MDRDFGIFSFLAVSVSAAGFFFGGFQYSFLILLSLMAIEFISTTLK     46
                         :.:|||||||.||.:|||||||||||||||||||:||||||||:||
RBAM_027650__      1 MLDQVGKDFGIFSFFAVIMSAAGFFFGGFQYSFLILLSVMAIEFISTSLK     50

BSNT_04460___     47 ETIIHKLSFKKVFARLVKKLVTLALISVCHFFDQLLNTQGSIRDLAIMFY     96
                     |:::.:||.:|:|||||||:|||||:||||||||||:|:|:||:||||||
RBAM_027650__     51 ESLLQQLSARKLFARLVKKIVTLALVSVCHFFDQLLHTEGAIRNLAIMFY    100

BSNT_04460___     97 ILYESVQIVVTASSLGIPVPQMLVDLLETLKNKFKRKP    134
                     |||||||||:|||||||||||:|||||:||||||||||
RBAM_027650__    101 ILYESVQIVITASSLGIPVPQVLVDLLDTLKNKFKRKP    138


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