Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04460 and RBAM_027650
See
Amino acid alignment /
Visit
BSNT_04460 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:58
# Commandline: needle
# -asequence dna-align/BSNT_04460___ytkC.1.9828.seq
# -bsequence dna-align/RBAM_027650___ytkC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04460___ytkC-RBAM_027650___ytkC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04460___ytkC-RBAM_027650___ytkC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04460___ytkC
# 2: RBAM_027650___ytkC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 421
# Identity: 318/421 (75.5%)
# Similarity: 318/421 (75.5%)
# Gaps: 20/421 ( 4.8%)
# Score: 1202.0
#
#
#=======================================
BSNT_04460___ 1 ---ATGGAT---------AGAGACTTTGGCATCTTTTCGTTTTTAGCAGT 38
.||||| |.||||||||||||||||||||||||.|||||
RBAM_027650__ 1 ATGTTGGATCAAGTGGGCAAAGACTTTGGCATCTTTTCGTTTTTTGCAGT 50
BSNT_04460___ 39 CAGCGTTTCAGCAGCGGGTTTTTTCTTTGGAGGTTTTCAGTATTCATTTC 88
.|.|.|.||.||||||||.||||||||.|||||||||||||||||.||||
RBAM_027650__ 51 GATCATGTCGGCAGCGGGGTTTTTCTTCGGAGGTTTTCAGTATTCGTTTC 100
BSNT_04460___ 89 TGATTTTGCTCTCTCTTATGGCAATTGAATTTATCAGTACGACTTTGAAG 138
||||||||||.||..|.|||||.|||||.|||||||||||.|..||.||.
RBAM_027650__ 101 TGATTTTGCTATCGGTCATGGCGATTGAGTTTATCAGTACAAGCTTAAAA 150
BSNT_04460___ 139 GAAACCATTATTCACAAACTG---TCATTTAAAAAGGTATTTGCCCGGCT 185
|||.|..||.|.||..|.||| .|| |.||||.|.|||||.|||||
RBAM_027650__ 151 GAATCTCTTTTGCAGCAGCTGAGCGCA---AGAAAGCTTTTTGCGCGGCT 197
BSNT_04460___ 186 TGTCAAAAAATTAGTCACGCTGGCTCTGATCTCTGTATGCCACTTTTTTG 235
.|||||||||.|.||.||.|||||..|..||||.||.|||||.|||||||
RBAM_027650__ 198 GGTCAAAAAAATCGTGACCCTGGCATTAGTCTCAGTTTGCCATTTTTTTG 247
BSNT_04460___ 236 ATCAGCTGCTGAATACACAGGGATCAATTCGTGACTTGGCTATTATGTTT 285
|.||||||||..||||..|.||..|.||.|||.|.||||||||.||||||
RBAM_027650__ 248 ACCAGCTGCTTCATACCGAAGGTGCCATCCGTAATTTGGCTATCATGTTT 297
BSNT_04460___ 286 TATATTCTT-TATGAATCTGTGCAAATTGTTGTGACAGCCAGTTCTCTTG 334
|||| |||| ||.|||||.||.||.||.||..|.||.||.||.||.||.|
RBAM_027650__ 298 TATA-TCTTATACGAATCGGTTCAGATCGTGATTACGGCAAGCTCGCTGG 346
BSNT_04460___ 335 GCATACCGGTTCCTCAGATGCTTGTCGATCTTTTAGAAACGTTAAAAAAT 384
|||||||||||||.|||.||||.|||||.||.||.||.||.||.||||||
RBAM_027650__ 347 GCATACCGGTTCCGCAGGTGCTCGTCGACCTATTGGATACTTTGAAAAAT 396
BSNT_04460___ 385 AAATTTAAGCGCAAACCGTAA 405
|||||.|||||||||||||||
RBAM_027650__ 397 AAATTCAAGCGCAAACCGTAA 417
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.