Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04459 and RBAM_027640

See DNA alignment / Visit BSNT_04459 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:57
# Commandline: needle
#    -asequence pep-align/BSNT_04459___ytkD.1.9828.seq
#    -bsequence pep-align/RBAM_027640___ytkD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04459___ytkD-RBAM_027640___ytkD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04459___ytkD-RBAM_027640___ytkD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04459___ytkD
# 2: RBAM_027640___ytkD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 159
# Identity:     142/159 (89.3%)
# Similarity:   149/159 (93.7%)
# Gaps:           1/159 ( 0.6%)
# Score: 756.0
# 
#
#=======================================

BSNT_04459___      1 MYEFKDYYQNTVQLSFDDQPFSDSPKHVWVICRFGGKWLLTEHEDRGYEF     50
                     ||||||||||||||||:.|||||||||||||||:|.|||||||||||:||
RBAM_027640__      1 MYEFKDYYQNTVQLSFEHQPFSDSPKHVWVICRYGDKWLLTEHEDRGFEF     50

BSNT_04459___     51 PGGKVEPMECAEEAALREVKEETGARVKSLKYLGQYKVLGKEKVIVKNIY    100
                     |||||||||||||||||||||||||.|:.|||:|||||||:|||||||||
RBAM_027640__     51 PGGKVEPMECAEEAALREVKEETGAAVRHLKYVGQYKVLGREKVIVKNIY    100

BSNT_04459___    101 FADIEKLEKQADYFETKGPVLFHELPENLSRNKKFSFIMKDSVLPISLKK    150
                     ||||||||||||||||||||||.||||||.||||||||||||||||||||
RBAM_027640__    101 FADIEKLEKQADYFETKGPVLFSELPENLPRNKKFSFIMKDSVLPISLKK    150

BSNT_04459___    151 LKESGWIE-    158
                     |||.|..: 
RBAM_027640__    151 LKEDGVFQS    159


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.