Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04454 and RBAM_027620

See DNA alignment / Visit BSNT_04454 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:57
# Commandline: needle
#    -asequence pep-align/BSNT_04454___ytlC.1.9828.seq
#    -bsequence pep-align/RBAM_027620___ytlC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04454___ytlC-RBAM_027620___ytlC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04454___ytlC-RBAM_027620___ytlC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04454___ytlC
# 2: RBAM_027620___ytlC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 260
# Identity:     222/260 (85.4%)
# Similarity:   239/260 (91.9%)
# Gaps:           0/260 ( 0.0%)
# Score: 1156.0
# 
#
#=======================================

BSNT_04454___      1 MSFLHVDHVTHTYFSIKEKTTAVRDIHFDAEKGDFISFLGPSGCGKTTLL     50
                     |||||||||||||||:|||||||:||||..||||||||||||||||||||
RBAM_027620__      1 MSFLHVDHVTHTYFSLKEKTTAVKDIHFQIEKGDFISFLGPSGCGKTTLL     50

BSNT_04454___     51 SIIAGLIEPSEGRVLIEGREPNQKEHNIGYMLQQDYLFPWKSIEENVLLG    100
                     ||:||||.|::|||||||..||.|||.|||||||||||||||||||||||
RBAM_027620__     51 SILAGLITPAQGRVLIEGSVPNHKEHQIGYMLQQDYLFPWKSIEENVLLG    100

BSNT_04454___    101 LKIADTLTEESKAAALGLLPEFGLIDVEKKYPKELSGGMRQRAALARTLA    150
                     |.|:.|||||.:|..|.|||:.|||.|||||||||||||||||||.||||
RBAM_027620__    101 LHISKTLTEEKRAEVLSLLPKLGLIGVEKKYPKELSGGMRQRAALVRTLA    150

BSNT_04454___    151 PNPSLLLLDEPFSALDFQTKLSLENLVFRTLKEYQKTAVLVTHDIGEAIA    200
                     |:|.||||||||||||||||||||||||||||::||||||||||||||||
RBAM_027620__    151 PDPGLLLLDEPFSALDFQTKLSLENLVFRTLKDFQKTAVLVTHDIGEAIA    200

BSNT_04454___    201 MSDTIFLFSNQPGTIHQIFTIPKELAAMLPFDARQEPSFQTLFQTIWKEL    250
                     |||||:|||||||.||||||:||||||:.||||||:|:||.|||||||||
RBAM_027620__    201 MSDTIYLFSNQPGAIHQIFTVPKELAALDPFDARQDPAFQPLFQTIWKEL    250

BSNT_04454___    251 NSLEKQQRNH    260
                     ||||||||:.
RBAM_027620__    251 NSLEKQQRHD    260


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