Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04454 and RBAM_027620
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:57
# Commandline: needle
# -asequence dna-align/BSNT_04454___ytlC.1.9828.seq
# -bsequence dna-align/RBAM_027620___ytlC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04454___ytlC-RBAM_027620___ytlC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04454___ytlC-RBAM_027620___ytlC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04454___ytlC
# 2: RBAM_027620___ytlC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 792
# Identity: 618/792 (78.0%)
# Similarity: 618/792 (78.0%)
# Gaps: 18/792 ( 2.3%)
# Score: 2390.5
#
#
#=======================================
BSNT_04454___ 1 ATGTCTTTCTTACATGTCGACCATGTAACCCATACTTATTTTTCTATTAA 50
||||||||.||||||||.||.||||||||.|||||||||||.||..|.||
RBAM_027620__ 1 ATGTCTTTTTTACATGTGGATCATGTAACACATACTTATTTCTCGCTGAA 50
BSNT_04454___ 51 AGAAAAAACAACGGCTGTGCGGGATATTCATTT--CGATGCCGAAAAAGG 98
||||||.|||||.||.|||...|||||.||||| .||| .||||||||
RBAM_027620__ 51 AGAAAAGACAACCGCCGTGAAAGATATACATTTTCAGAT--TGAAAAAGG 98
BSNT_04454___ 99 CGATTTCATCTCATTTCTCGGCCCAAGCGGCTGCGGAAAAACAACATTGC 148
.|||||||||||.||||||||.||.|||||.|||||||||||||||.|.|
RBAM_027620__ 99 GGATTTCATCTCCTTTCTCGGGCCGAGCGGATGCGGAAAAACAACACTCC 148
BSNT_04454___ 149 TTTCCATTATTGCCGGTTTGATTGAGCCATCAGAAGGCAGAGTTCTGATT 198
|.||||||.|.|||||..|.|||...||..|..|||||.|.||.||||||
RBAM_027620__ 149 TGTCCATTCTGGCCGGCCTTATTACTCCTGCGCAAGGCCGGGTGCTGATT 198
BSNT_04454___ 199 GAAGGCCGTGAGCCGAATCAAAAAGAACATAATATTGGCTATATGCTTCA 248
|||||..|.|.||||||.||.||||||||..|.||.||.|||||||||||
RBAM_027620__ 199 GAAGGAAGCGTGCCGAACCATAAAGAACACCAAATCGGTTATATGCTTCA 248
BSNT_04454___ 249 GCAGGATTACTTATTTCCCTGGAAATCTATCGAGGAAAATGTGCTTCTCG 298
|||||||||.||||||||.||||||||.||.||||||||.|||||.||||
RBAM_027620__ 249 GCAGGATTATTTATTTCCTTGGAAATCAATTGAGGAAAACGTGCTGCTCG 298
BSNT_04454___ 299 GTTTAAAAATCGCCGACACGCTGACAGAAGAAAGCAAAGCCGCTGCA--- 345
|||||.|.||..|..|.||..|.|||||||||| |||| .||||.|
RBAM_027620__ 299 GTTTACACATTTCAAAAACATTAACAGAAGAAA--AAAG-AGCTGAAGTT 345
BSNT_04454___ 346 CTCGGTCTATTGCCGGAGTTCGGCCTCATAGATGTGGAGAAAAAATATCC 395
|||.|.||..||||..||.||||..|.||.|..||.||.||.|||||.||
RBAM_027620__ 346 CTCAGCCTTCTGCCTAAGCTCGGATTAATCGGCGTTGAAAAGAAATACCC 395
BSNT_04454___ 396 GAAAGAACTGTCAGGCGGGATGCGCCAGCGGGCTGCGCTTGCAAGAACAC 445
||||||.|||||||||||||||||.||||||||.||.||||..|||||.|
RBAM_027620__ 396 GAAAGAGCTGTCAGGCGGGATGCGGCAGCGGGCGGCACTTGTCAGAACTC 445
BSNT_04454___ 446 TTGCGCCTAACCCTAGTCTGCTTTTGCTGGATGAGCCATTTTCCGCGCTT 495
|||||||..||||..|.|||||..|.||.|||||.||.|||||||||||.
RBAM_027620__ 446 TTGCGCCGGACCCGGGACTGCTGCTCCTTGATGAACCGTTTTCCGCGCTG 495
BSNT_04454___ 496 GATTTTCAGACAAAGCTGTCTTTGGAAAACCTGGTATTCCGCACATTAAA 545
||.|||||.||.|||||.||||||||||||||.||.|||.|.||||||||
RBAM_027620__ 496 GACTTTCAAACGAAGCTTTCTTTGGAAAACCTTGTCTTCAGAACATTAAA 545
BSNT_04454___ 546 GGAATATCAAAAAACAGCAGTGCTTGTCACTCATGATATAGGGGAAGCGA 595
|||.|.|||||||||.||.|||||.|||||.||.|||||.||.|||||.|
RBAM_027620__ 546 GGATTTTCAAAAAACCGCCGTGCTCGTCACCCACGATATCGGTGAAGCCA 595
BSNT_04454___ 596 TAGCGATGAGCGATACGATCTTTTTATTTTCAAATCAGCCGGGCACCATC 645
|.||.|||||||||||.||||.|||||||||.||||||||||||.|||||
RBAM_027620__ 596 TCGCCATGAGCGATACAATCTATTTATTTTCGAATCAGCCGGGCGCCATC 645
BSNT_04454___ 646 CATCAGATTTTTACCATTCCTAAGGAATTGGCCGC----GATGTTGCCTT 691
||.||.||.||.|||.|.||.|||||..|.||.|| ||| ||.|
RBAM_027620__ 646 CACCAAATATTCACCGTGCCCAAGGAGCTCGCGGCTTTAGAT----CCGT 691
BSNT_04454___ 692 TTGACGCCCGTCAGGAACCTTCCTTCCAGACACTGTTTCAAACGATATGG 741
|||||||.||||||||.||..||||.|||.|.|||||||||||.||||||
RBAM_027620__ 692 TTGACGCGCGTCAGGATCCGGCCTTTCAGCCGCTGTTTCAAACCATATGG 741
BSNT_04454___ 742 AAGGAGCTGAATTCTCTTGAGAAACAGCAAAGAAACCATTGA 783
||||||||||||||.|||||.||||||||..|..||.|||||
RBAM_027620__ 742 AAGGAGCTGAATTCCCTTGAAAAACAGCAGCGGCACGATTGA 783
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