Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04450 and RBAM_027590

See DNA alignment / Visit BSNT_04450 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:57
# Commandline: needle
#    -asequence pep-align/BSNT_04450___ytmB.1.9828.seq
#    -bsequence pep-align/RBAM_027590___ytmB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04450___ytmB-RBAM_027590___ytmB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04450___ytmB-RBAM_027590___ytmB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04450___ytmB
# 2: RBAM_027590___ytmB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 80
# Identity:      64/80 (80.0%)
# Similarity:    72/80 (90.0%)
# Gaps:           0/80 ( 0.0%)
# Score: 343.0
# 
#
#=======================================

BSNT_04450___      1 MGMPVEFNTLIVTKGKEVRIDENIFTLEKDGYRVYPMEIPMDVRKTKFGE     50
                     |||||||||:|||||.|.||:||||.|||:||||||::|||||||||.||
RBAM_027590__      1 MGMPVEFNTMIVTKGNEKRIEENIFLLEKEGYRVYPLDIPMDVRKTKTGE     50

BSNT_04450___     51 KSGTAEVQKLQWEDGRTIITYKLTSLHSVN     80
                     ||||.|||||:|.:|||.|||:||||||.|
RBAM_027590__     51 KSGTGEVQKLEWANGRTSITYRLTSLHSTN     80


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