Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04442 and RBAM_027520
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:55
# Commandline: needle
# -asequence pep-align/BSNT_04442___ytpB.1.9828.seq
# -bsequence pep-align/RBAM_027520___ytpB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04442___ytpB-RBAM_027520___ytpB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04442___ytpB-RBAM_027520___ytpB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04442___ytpB
# 2: RBAM_027520___ytpB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 368
# Identity: 310/368 (84.2%)
# Similarity: 339/368 (92.1%)
# Gaps: 8/368 ( 2.2%)
# Score: 1701.0
#
#
#=======================================
BSNT_04442___ 1 MLTVPEHPFGLMAKVYRDIFPLVHQELDIWKQKSESIHNSELKAQATASI 50
|||||||||.|||||||:|||||||||::|::||:||.|:||:.||.|||
RBAM_027520__ 1 MLTVPEHPFNLMAKVYREIFPLVHQELNMWREKSDSIKNTELRQQAAASI 50
BSNT_04442___ 51 RDKTFHCEGGGILALLSGSQKQKCVEFIIAYQTISDYLDNLCDRSTSLDP 100
|||:||||||||||||||.||||||:||||||||||||||||||||||||
RBAM_027520__ 51 RDKSFHCEGGGILALLSGEQKQKCVQFIIAYQTISDYLDNLCDRSTSLDP 100
BSNT_04442___ 101 QDFRMLHASMQDALTVGAELQNYYQFREEQDDSGYLHELVKTCQRVLGSI 150
:||||||.||:||||||||::.|||:|:||||.|||||||:|||||||||
RBAM_027520__ 101 EDFRMLHLSMRDALTVGAEVRPYYQYRDEQDDGGYLHELVRTCQRVLGSI 150
BSNT_04442___ 151 EHYDMIKPYLLELCGYYCDLQVHKHVIEHERVPRLEKWFTQYESELPEME 200
|||.:|||||||||.|||||||||||:||||||||:.||.||.|:|||||
RBAM_027520__ 151 EHYGIIKPYLLELCDYYCDLQVHKHVVEHERVPRLKGWFEQYRSQLPEME 200
BSNT_04442___ 201 WYEFSACAGSTLGIFCLVAYSFQPDFTESTAKKIRDSYFPYIQGLHILLD 250
|:|||||||||||||||||||||.||.|.||:|||.||||||||||||||
RBAM_027520__ 201 WFEFSACAGSTLGIFCLVAYSFQSDFNEHTAEKIRSSYFPYIQGLHILLD 250
BSNT_04442___ 251 YLIDQEEDLLEGDLNFCSYYQSHEEMMNRLEHFIHKADEHLQGIPHENFH 300
|||||||||||||||||:|||||||||.||:|||.|||||||||||||||
RBAM_027520__ 251 YLIDQEEDLLEGDLNFCTYYQSHEEMMQRLQHFIEKADEHLQGIPHENFH 300
BSNT_04442___ 301 RLINRGLLGVYLSDDKVAGQKEMGRLAKKLIKASGKTSLFFYINGRAYRK 350
|||||||||||||||||||||||||||:|||:||||||.|||||||||||
RBAM_027520__ 301 RLINRGLLGVYLSDDKVAGQKEMGRLARKLIRASGKTSFFFYINGRAYRK 350
BSNT_04442___ 351 FQKMSWMKNSKKKAQIIC 368
||||:|.|:|
RBAM_027520__ 351 FQKMAWTKSS-------- 360
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