Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04441 and RBAM_027500
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:55
# Commandline: needle
# -asequence pep-align/BSNT_04441___ytqB.1.9828.seq
# -bsequence pep-align/RBAM_027500___ytqB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04441___ytqB-RBAM_027500___ytqB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04441___ytqB-RBAM_027500___ytqB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04441___ytqB
# 2: RBAM_027500___ytqB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 194
# Identity: 139/194 (71.6%)
# Similarity: 159/194 (82.0%)
# Gaps: 1/194 ( 0.5%)
# Score: 724.0
#
#
#=======================================
BSNT_04441___ 1 MILKKILPYSKELLKMAAGEGDIVVDATMGNGHDTQFLAELVGENGHVYA 50
|.|..|||:||||||.||.||||.|||||||||||.|||.||||.|||:|
RBAM_027500__ 1 MTLMHILPFSKELLKSAAQEGDITVDATMGNGHDTYFLAGLVGETGHVHA 50
BSNT_04441___ 51 FDIQESAVANTKERLGDMYQARTTLFHKSHDKIAESLPPETHGKVAAAVF 100
||||..|:|.||||||..:..|.||.|||||:|..|||.:.||:||.|||
RBAM_027500__ 51 FDIQADALAKTKERLGADFSPRVTLHHKSHDQIKASLPEDAHGRVACAVF 100
BSNT_04441___ 101 NLGYLPGGDKSITTNGSSTIKAIEQLLSIMKDEGLIVLVVYHGHPEGKAE 150
||||||||||||||||.|||.||||||.::|:.|||||||||||||||.|
RBAM_027500__ 101 NLGYLPGGDKSITTNGHSTISAIEQLLELLKENGLIVLVVYHGHPEGKTE 150
BSNT_04441___ 151 KNDVLEFCRDLDQQSARVLTYGFINQQNDPPFIVAIEKKAQISK 194
|:.:||:|.:|||:.||||:|||:||:||||||:|||||:...
RBAM_027500__ 151 KSALLEYCSNLDQEKARVLSYGFLNQRNDPPFIIAIEKKSAGK- 193
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