Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04437 and RBAM_027400

See DNA alignment / Visit BSNT_04437 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:55
# Commandline: needle
#    -asequence pep-align/BSNT_04437___ytrA.1.9828.seq
#    -bsequence pep-align/RBAM_027400___ytrA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04437___ytrA-RBAM_027400___ytrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04437___ytrA-RBAM_027400___ytrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04437___ytrA
# 2: RBAM_027400___ytrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 130
# Identity:     124/130 (95.4%)
# Similarity:   128/130 (98.5%)
# Gaps:           0/130 ( 0.0%)
# Score: 630.0
# 
#
#=======================================

BSNT_04437___      1 MIQIDPRSSTPIYEQIIQQMKELCLKGIMKPGDKLPSVRELATIIIANPN     50
                     |||||||||||||||||||:||||||||||||||||||||||||||||||
RBAM_027400__      1 MIQIDPRSSTPIYEQIIQQLKELCLKGIMKPGDKLPSVRELATIIIANPN     50

BSNT_04437___     51 TVSKAYKELEREGIIETLRGRGTYISENAKTTLVEGKMTMIKEQLKQLII    100
                     |||||||||||:|:||||||||||||||||||||||||||||||||||||
RBAM_027400__     51 TVSKAYKELERDGVIETLRGRGTYISENAKTTLVEGKMTMIKEQLKQLII    100

BSNT_04437___    101 DAHYAGVELEKLHEWIKEISADVKGGKKND    130
                     ||||||||||||.||||||||||||||.:|
RBAM_027400__    101 DAHYAGVELEKLQEWIKEISADVKGGKDHD    130


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