Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04437 and RBAM_027400
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:55
# Commandline: needle
# -asequence dna-align/BSNT_04437___ytrA.1.9828.seq
# -bsequence dna-align/RBAM_027400___ytrA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04437___ytrA-RBAM_027400___ytrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04437___ytrA-RBAM_027400___ytrA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04437___ytrA
# 2: RBAM_027400___ytrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 393
# Identity: 345/393 (87.8%)
# Similarity: 345/393 (87.8%)
# Gaps: 0/393 ( 0.0%)
# Score: 1533.0
#
#
#=======================================
BSNT_04437___ 1 ATGATTCAAATCGATCCAAGAAGCTCAACACCCATTTACGAACAAATTAT 50
|||||||||||||||||.|||||||||||.||.|||||.||.||.||.||
RBAM_027400__ 1 ATGATTCAAATCGATCCGAGAAGCTCAACTCCGATTTATGAGCAGATCAT 50
BSNT_04437___ 51 TCAGCAAATGAAAGAGCTTTGTTTGAAAGGGATCATGAAGCCTGGTGATA 100
.||||||.||||||||||||||||.|||||||||||||||||.||.||||
RBAM_027400__ 51 ACAGCAACTGAAAGAGCTTTGTTTAAAAGGGATCATGAAGCCGGGGGATA 100
BSNT_04437___ 101 AGCTTCCTTCTGTCAGAGAATTGGCGACGATCATTATTGCGAATCCGAAC 150
|.||||||||||||||.||||||||.|||||||||||.||.|||||||||
RBAM_027400__ 101 AACTTCCTTCTGTCAGGGAATTGGCAACGATCATTATCGCCAATCCGAAC 150
BSNT_04437___ 151 ACTGTCAGCAAAGCGTATAAAGAGCTTGAGCGAGAGGGGATTATTGAAAC 200
||.||||||||||||||.||.|||||.||.||.||.||..|.||||||||
RBAM_027400__ 151 ACAGTCAGCAAAGCGTACAAGGAGCTCGAACGCGATGGTGTCATTGAAAC 200
BSNT_04437___ 201 GCTGCGGGGCAGAGGGACCTATATATCGGAGAATGCAAAAACGACACTGG 250
||||.||||.|||||.||.|||||||||||||||||||||||||||.|||
RBAM_027400__ 201 GCTGAGGGGAAGAGGAACGTATATATCGGAGAATGCAAAAACGACATTGG 250
BSNT_04437___ 251 TTGAAGGGAAGATGACGATGATTAAAGAGCAACTCAAACAGCTCATCATC 300
||||||||||||||||||||||.|||||||||.|.|||||||||||||||
RBAM_027400__ 251 TTGAAGGGAAGATGACGATGATAAAAGAGCAATTGAAACAGCTCATCATC 300
BSNT_04437___ 301 GATGCACACTATGCAGGGGTTGAGCTGGAAAAACTGCACGAATGGATAAA 350
|||||.||.||.||.||.|||||||||||.||.|||||.|||||||||||
RBAM_027400__ 301 GATGCCCATTACGCGGGAGTTGAGCTGGAGAAGCTGCAGGAATGGATAAA 350
BSNT_04437___ 351 GGAAATCAGCGCTGATGTGAAGGGAGGCAAAAAAAATGATTGA 393
|||||||||||||||||||||.||||||||..|..||||||||
RBAM_027400__ 351 GGAAATCAGCGCTGATGTGAAAGGAGGCAAGGATCATGATTGA 393
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