Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04433 and RBAM_027370

See DNA alignment / Visit BSNT_04433 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:54
# Commandline: needle
#    -asequence pep-align/BSNT_04433___ytrD.1.9828.seq
#    -bsequence pep-align/RBAM_027370___ytrC1.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04433___ytrD-RBAM_027370___ytrC1.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04433___ytrD-RBAM_027370___ytrC1.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04433___ytrD
# 2: RBAM_027370___ytrC1
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 330
# Identity:     161/330 (48.8%)
# Similarity:   222/330 (67.3%)
# Gaps:           7/330 ( 2.1%)
# Score: 830.0
# 
#
#=======================================

BSNT_04433___      1 MPDSGLLYKEWKQNKVALVITILVFILGNPLSIFNMYLTYQGCVTSKENW     50
                     |...||||.|||:|:...:.:.::.:..||..::|.|.|||.|:.::.  
RBAM_027370__      1 MIPRGLLYTEWKKNQWLFLCSGILLMAANPFMVYNNYSTYQECLNNQA--     48

BSNT_04433___     51 VGPCVFGVDYLNGTFISFFWIWGVVLAVSQLGIERSKSFFDFTLSLPYTR    100
                     :..|.|.|:|.||:.:||.|...|::||..||:||:|...|..||:||:|
RBAM_027370__     49 LQDCEFVVNYTNGSPLSFSWSVSVIIAVFLLGLERTKGTMDALLSMPYSR     98

BSNT_04433___    101 GQIFHAKFFTGGMVIVVPQLIGYVLSVLLIMLLKPDQAVYFHNYSLGMII    150
                     ||||..||:.||.||||||.|||..:.|||.||||.....|.::|:|||:
RBAM_027370__     99 GQIFQTKFWLGGAVIVVPQAIGYGAASLLISLLKPSHTYDFDHFSIGMIV    148

BSNT_04433___    151 VSMLAYSLVMAGGALTGNIFAQLLVSFTVAISPFLLISLPAINLEIL---    197
                     :|.:||:|:||.|||||.||||||.:|||.:.|||||.|||.|||::   
RBAM_027370__    149 ISFMAYALLMASGALTGQIFAQLLTAFTVTVLPFLLIGLPAANLEVVFDI    198

BSNT_04433___    198 -IGGSIDFIHGPVPKWVQYFI-PIIYVDSKWAENSPYYLVIPAIMTIIFY    245
                      :|....||...:...:..|: ||.||.:.|.......|:||.:|:::||
RBAM_027370__    199 SVGDQFSFISSYIESRLFIFVTPIGYVFNDWIRERDLVLIIPIVMSLVFY    248

BSNT_04433___    246 IIGYISFVKLSNERNGYFFLWKPLNRPVQIIVIIIGIMGFGYFGFSASES    295
                     :|||:||:|..|||||.||||:.|:|||||:||...:||||.||:..:::
RBAM_027370__    249 LIGYVSFLKHPNERNGRFFLWRKLDRPVQILVIAFAVMGFGVFGYGVTDT    298

BSNT_04433___    296 FTGYLIGMAAGAVIGFLISYFAIYKKMKLL    325
                     ..|||.|:..||||||.||||.:|:|.|.:
RBAM_027370__    299 MFGYLAGIIFGAVIGFFISYFTVYRKSKHM    328


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