Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04431 and RBAM_027340
See
DNA alignment /
Visit
BSNT_04431 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:54
# Commandline: needle
# -asequence pep-align/BSNT_04431___ytrF.1.9828.seq
# -bsequence pep-align/RBAM_027340___ytrF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04431___ytrF-RBAM_027340___ytrF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04431___ytrF-RBAM_027340___ytrF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04431___ytrF
# 2: RBAM_027340___ytrF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 437
# Identity: 346/437 (79.2%)
# Similarity: 402/437 (92.0%)
# Gaps: 2/437 ( 0.5%)
# Score: 1781.0
#
#
#=======================================
BSNT_04431___ 1 MRFKDQVHFIRRNMKKNRLRVFMTILATTMAYAFLVVLSSVGFGIQKTIT 50
||||||:|||||||||||||||||:||||||.||||||:|||||||||||
RBAM_027340__ 1 MRFKDQIHFIRRNMKKNRLRVFMTVLATTMACAFLVVLASVGFGIQKTIT 50
BSNT_04431___ 51 DMTMSQQIVTKVSVMGKEGDKPIKKADLEKYDHVRSVVERTQMYEPNKAT 100
|:||||||||:::|:|:|..|.:||:|||||.:|:|||||||:||||||:
RBAM_027340__ 51 DITMSQQIVTEINVLGQENGKAVKKSDLEKYKNVKSVVERTQVYEPNKAS 100
BSNT_04431___ 101 LGNRTNESSNLIFTNMNDELKANMELEKGRVAKSENEIVVGYDFAKRLLT 150
|||||||.|.::.||||||:||||||::||||::||||||||||||.|||
RBAM_027340__ 101 LGNRTNEDSAIVLTNMNDEVKANMELDQGRVARTENEIVVGYDFAKNLLT 150
BSNT_04431___ 151 KKESEEYNKKIEEAKGNPEDIKEPKGYTKDILNKTIELSVSKTDPKTGDV 200
|||::.|:|::::.:|:..::|:|||||||:|||||:||:|||: |.|||
RBAM_027340__ 151 KKEADAYDKELKDHQGDMSEVKKPKGYTKDLLNKTIQLSISKTN-KDGDV 199
BSNT_04431___ 201 TKTKTYDFKIVGITKKPSQDWMEDSNIFISDQFKKDFSEFLDFKGGNVET 250
.||||||||:||||||||||||||:|||:|||||||||.|||.|.||.|.
RBAM_027340__ 200 EKTKTYDFKVVGITKKPSQDWMEDTNIFVSDQFKKDFSTFLDLKNGNAEK 249
BSNT_04431___ 251 NIGVFADKFENVEQLTNDLTDDGYYVTSVTTELEGANTFFMVFKIGLIFV 300
:|.|:||||::|:|||:||||||:||.||||||:|.||||:|||||||||
RBAM_027340__ 250 SINVYADKFDHVDQLTHDLTDDGFYVRSVTTELKGVNTFFLVFKIGLIFV 299
BSNT_04431___ 301 GCIAVIISAIGIFNTMTMAVTERTQEIGIMKAIGASPSIIRRMFLMESAY 350
|.|||:||||||||||||||||||||||||||||||||||||||||||||
RBAM_027340__ 300 GFIAVVISAIGIFNTMTMAVTERTQEIGIMKAIGASPSIIRRMFLMESAY 349
BSNT_04431___ 351 IGILGCVIGIIISYGVSYLVNLAVPMILAATSG-SDAGDLNYTFSYIPAS 399
|||||.|||||||||||:.||||||:||.|..| :.|.||:|||||||.|
RBAM_027340__ 350 IGILGSVIGIIISYGVSFAVNLAVPVILKAVGGNTGAEDLHYTFSYIPLS 399
BSNT_04431___ 400 LVIIAVVICGGVAVISGMNPARKATKTNVLTALRREL 436
||:||||||.|||||||||||||||||||||||||||
RBAM_027340__ 400 LVVIAVVICAGVAVISGMNPARKATKTNVLTALRREL 436
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.