Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04428 and RBAM_027320

See DNA alignment / Visit BSNT_04428 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:54
# Commandline: needle
#    -asequence pep-align/BSNT_04428___ytsB.1.9828.seq
#    -bsequence pep-align/RBAM_027320___bceS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04428___ytsB-RBAM_027320___bceS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04428___ytsB-RBAM_027320___bceS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04428___ytsB
# 2: RBAM_027320___bceS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 334
# Identity:     215/334 (64.4%)
# Similarity:   277/334 (82.9%)
# Gaps:           0/334 ( 0.0%)
# Score: 1144.0
# 
#
#=======================================

BSNT_04428___      1 MIKAFLIERRSWIAAFLFQQALMLFIVFVDPSISFGNVLYMVYLCILFFI     50
                     |||:||:||:||||.||||||::||..::||||.|.:|||.|||.:|.|:
RBAM_027320__      1 MIKSFLLERKSWIAMFLFQQAVLLFAAYIDPSIPFFSVLYFVYLSLLVFL     50

BSNT_04428___     51 IFLWFRYRKETAFYKSLKTWENNLDVTAINEPETPFEAMVERSIAGQTEH    100
                     :||.||||||||:||||:.|:.|||::.:..|::|||::||.||.||||.
RBAM_027320__     51 VFLLFRYRKETAYYKSLREWDANLDMSYLKAPDSPFESIVEESIEGQTEQ    100

BSNT_04428___    101 LKQTAARHRLALENEKDELMAWIHEVKTPLTAMHLIIDRMEEKALKSQLS    150
                     |::::...:.|.|:|||:||:||||||||||||||:|:|::|:.||:.|.
RBAM_027320__    101 LRKSSLDLQAASEHEKDDLMSWIHEVKTPLTAMHLMIERLDEQPLKAPLL    150

BSNT_04428___    151 YEWLRIHLLLDQQLHQKRISFIENDLSVEFIQLQPLIFKEIKDLQSWCIQ    200
                     |||||||.||||||||||:||||||||.:.|||:||:|||||:|||||||
RBAM_027320__    151 YEWLRIHHLLDQQLHQKRLSFIENDLSFQRIQLRPLVFKEIKNLQSWCIQ    200

BSNT_04428___    201 KGIGFDIKLEAKEVLSDAKWLAFIIRQLLTNAVKYSEASEIEIKSFQKGE    250
                     |||||||:|::.:|.||.|||:|||||||:||||||||.:|.:||:::..
RBAM_027320__    201 KGIGFDIQLDSPDVHSDGKWLSFIIRQLLSNAVKYSEADDITVKSYEQNG    250

BSNT_04428___    251 QTQLQVKDCGRGIDPKDVPRIFDKGFTSTTDHHDQASTGMGLYLAKKAAA    300
                     :..:.::|.|.||:|||:||||:||||||....|.||||||||||:||||
RBAM_027320__    251 RVHVDIEDRGIGIEPKDLPRIFEKGFTSTRMRRDHASTGMGLYLAQKAAA    300

BSNT_04428___    301 PLLIHIDVESEFGAGTVFTLTFPIRNQFEHVISV    334
                     ||||.|.|.||..:||||||.||.:|....:.||
RBAM_027320__    301 PLLIQISVRSEPESGTVFTLVFPKQNDAVSMFSV    334


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