Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04427 and RBAM_027310

See DNA alignment / Visit BSNT_04427 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:54
# Commandline: needle
#    -asequence pep-align/BSNT_04427___ytsC.1.9828.seq
#    -bsequence pep-align/RBAM_027310___bceA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04427___ytsC-RBAM_027310___bceA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04427___ytsC-RBAM_027310___bceA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04427___ytsC
# 2: RBAM_027310___bceA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 253
# Identity:     204/253 (80.6%)
# Similarity:   227/253 (89.7%)
# Gaps:           3/253 ( 1.2%)
# Score: 1041.0
# 
#
#=======================================

BSNT_04427___      1 MVILEANKIRKSYGNKLNKQEVLKGIDIHIEKGEFVSIMGASGSGKTTLL     50
                      :||||..|:|||||||||||||||||:.|.|||||||||.|||||||||
RBAM_027310__      1 -MILEAGNIQKSYGNKLNKQEVLKGIDLQIHKGEFVSIMGPSGSGKTTLL     49

BSNT_04427___     51 NVLSSIDQVSHGTIHINGNDMTAMKEKQLAEFRKQHLGFIFQDYNLLDTL    100
                     |||||||:||.|||.:|..::|:|||||||||||:|||||||||||||||
RBAM_027310__     50 NVLSSIDKVSAGTIKLNETEITSMKEKQLAEFRKRHLGFIFQDYNLLDTL     99

BSNT_04427___    101 TVKENILLPLSITKLSKKEANRKFEEVAKELGIYELRDKYPNEISGGQKQ    150
                     ||||||||||||||:|||||:.:|.|.|:|||||:||.|||:||||||||
RBAM_027310__    100 TVKENILLPLSITKMSKKEADLRFAETAEELGIYDLRHKYPSEISGGQKQ    149

BSNT_04427___    151 RTSAGRAFIHDPSIIFADEPTGALDSKSASDLLNKLSQLNQKRNATIIMV    200
                     ||||.||.||:|.||||||||||||||:|.|||||||:|||||.|||:||
RBAM_027310__    150 RTSAARAVIHEPGIIFADEPTGALDSKAAMDLLNKLSRLNQKRRATIVMV    199

BSNT_04427___    201 THDPVAASYCGRVIFIKDGQMYTQLNKGGQDRQTFFQDIMKTQGVLGGVQ    250
                     |||||||||.|||:|||||::|||||||||||..|||||||||.||||:|
RBAM_027310__    200 THDPVAASYSGRVVFIKDGRVYTQLNKGGQDRPDFFQDIMKTQSVLGGIQ    249

BSNT_04427___    251 HEH    253
                     .  
RBAM_027310__    250 A--    250


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