Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04417 and RBAM_027250

See DNA alignment / Visit BSNT_04417 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:53
# Commandline: needle
#    -asequence pep-align/BSNT_04417___leuS.1.9828.seq
#    -bsequence pep-align/RBAM_027250___leuS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04417___leuS-RBAM_027250___leuS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04417___leuS-RBAM_027250___leuS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04417___leuS
# 2: RBAM_027250___leuS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 804
# Identity:     734/804 (91.3%)
# Similarity:   769/804 (95.6%)
# Gaps:           0/804 ( 0.0%)
# Score: 3981.0
# 
#
#=======================================

BSNT_04417___      1 MSFQHKEIEKKWQTYWLENKTFATLDNNEKQKFYALDMFPYPSGAGLHVG     50
                     |||||::||||||.|||::||||..:.|:|.|||||||||||||||||||
RBAM_027250__      1 MSFQHEKIEKKWQNYWLDHKTFAVSEENDKPKFYALDMFPYPSGAGLHVG     50

BSNT_04417___     51 HPEGYTATDILSRMKRMQGYDVLHPMGWDAFGLPAEQYALDTGNDPAVFT    100
                     ||||||||||||||:|||||:||||||||||||||||||||||||||.||
RBAM_027250__     51 HPEGYTATDILSRMRRMQGYNVLHPMGWDAFGLPAEQYALDTGNDPAEFT    100

BSNT_04417___    101 KQNIDNFRRQIQALGFSYDWDREINTTDPEYYKWTQWIFLKLYEKGLAYV    150
                     ||||||||||||:||||||||||||||||:|||||||||.||||||||||
RBAM_027250__    101 KQNIDNFRRQIQSLGFSYDWDREINTTDPDYYKWTQWIFTKLYEKGLAYV    150

BSNT_04417___    151 DEVPVNWCPALGTVLANEEVIDGKSERGGHPVERRPMKQWMLKITAYADR    200
                     |||||||||||||||||||||||||||||||||||||:||||||||||||
RBAM_027250__    151 DEVPVNWCPALGTVLANEEVIDGKSERGGHPVERRPMRQWMLKITAYADR    200

BSNT_04417___    201 LLEDLEELDWPESIKDMQRNWIGRSEGAHVHFAIDGHDDSFTVFTTRPDT    250
                     ||||||:|||||||||||||||||||||:|||||||.||:||||||||||
RBAM_027250__    201 LLEDLEDLDWPESIKDMQRNWIGRSEGANVHFAIDGTDDTFTVFTTRPDT    250

BSNT_04417___    251 LFGATYTVLAPEHALVENITTAEQKEAVEAYIKEIQSKSDLERTDLAKTK    300
                     ||||.|.||||||.|||.|||.||||||:||:||:|:|||||||||||||
RBAM_027250__    251 LFGAAYAVLAPEHELVEAITTPEQKEAVDAYVKEVQAKSDLERTDLAKTK    300

BSNT_04417___    301 TGVFTGAYAINPVNGEKLPIWIADYVLASYGTGAVMAVPGHDERDFEFAK    350
                     |||||||||:||.||||||||||||||||||||||||||.||||||||||
RBAM_027250__    301 TGVFTGAYAVNPANGEKLPIWIADYVLASYGTGAVMAVPAHDERDFEFAK    350

BSNT_04417___    351 TFGLPVKEVVKGGNVEEAAYTGDGEHVNSDFLNGLHKQEAIEKVIAWLEE    400
                     .|.|||||||||||.||.|||||||||||.|||||.|.|||||:||||||
RBAM_027250__    351 VFSLPVKEVVKGGNTEEEAYTGDGEHVNSGFLNGLKKAEAIEKMIAWLEE    400

BSNT_04417___    401 TKNGEKKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTSTAVPEEELPLILP    450
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
RBAM_027250__    401 TKNGEKKVTYRLRDWLFSRQRYWGEPIPVIHWEDGTSTAVPAEELPLILP    450

BSNT_04417___    451 KTDEIKPSGTGESPLANIKEWVEVTDPETGKKGRRETNTMPQWAGSCWYF    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_027250__    451 KTDEIKPSGTGESPLANIKEWVEVTDPETGKKGRRETNTMPQWAGSCWYF    500

BSNT_04417___    501 LRYIDPHNPDQLASPEKLEKWLPVDMYIGGAEHAVLHLLYARFWHKFLYD    550
                     ||:|||.|||||||||||:||||||:||||||||||||||||||||||||
RBAM_027250__    501 LRFIDPKNPDQLASPEKLDKWLPVDIYIGGAEHAVLHLLYARFWHKFLYD    550

BSNT_04417___    551 IGVVPTKEPFQKLYNQGMILGENNEKMSKSKGNVVNPDEIVASHGADTLR    600
                     ||||||||||||||||||||||||||||||:|||||||||||||||||||
RBAM_027250__    551 IGVVPTKEPFQKLYNQGMILGENNEKMSKSRGNVVNPDEIVASHGADTLR    600

BSNT_04417___    601 LYEMFMGPLDASIAWSESGLDGARRFLDRVWRLFIEDSGELNGKIVEGAG    650
                     ||||||||||||||||||||||||||||||||||||::|||.||:.||||
RBAM_027250__    601 LYEMFMGPLDASIAWSESGLDGARRFLDRVWRLFIEENGELTGKVTEGAG    650

BSNT_04417___    651 ETLERVYHETVMKVTDHYEGLRFNTGISQLMVFINEAYKATELPKEYMEG    700
                     |||||||||||||||:::|.||||||||||||||||||||.|||:||:||
RBAM_027250__    651 ETLERVYHETVMKVTENFEALRFNTGISQLMVFINEAYKANELPREYIEG    700

BSNT_04417___    701 FVKLLSPVAPHLAEELWEKLGHSGTIAYEAWPVYDETKLVDDEVEIVVQL    750
                     |||||||:||||||||||||||.|:|||||||.|||:|||||||||||||
RBAM_027250__    701 FVKLLSPIAPHLAEELWEKLGHEGSIAYEAWPAYDESKLVDDEVEIVVQL    750

BSNT_04417___    751 NGKVKAKLQVPADATKEQLEQLAQADEKVKEQLEGKTIRKIIAVPGTLVN    800
                     ||||||||.|||||.|..||||||||||||||||||||||||||||.|||
RBAM_027250__    751 NGKVKAKLMVPADADKAALEQLAQADEKVKEQLEGKTIRKIIAVPGKLVN    800

BSNT_04417___    801 IVAN    804
                     ||||
RBAM_027250__    801 IVAN    804


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