Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04558 and RBAM_027230

See DNA alignment / Visit BSNT_04558 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:00
# Commandline: needle
#    -asequence pep-align/BSNT_04558___yuaI.1.9828.seq
#    -bsequence pep-align/RBAM_027230.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04558___yuaI-RBAM_027230.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04558___yuaI-RBAM_027230.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04558___yuaI
# 2: RBAM_027230
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 176
# Identity:      52/176 (29.5%)
# Similarity:    79/176 (44.9%)
# Gaps:          21/176 (11.9%)
# Score: 146.5
# 
#
#=======================================

BSNT_04558___      1 MVTVREAKLEDIKDIAKVHVDSWRTTYHEIIPIDYLNSLNYKEFEDK-WK     49
                       .:|..|..|||.:.:|...||..||..|||....:......::|: .:
RBAM_027230        1 --MIRAMKTNDIKQVRQVAERSWHHTYEGIIPRHIQDQFLESAYQDEMME     48

BSNT_04558___     50 SRSLKGVFVAQDEMDSVFGFASFGPIRSEQEGYDGELYAIYLLEERQRQG     99
                     .|.|..:|...:|...|.|||:..|:   |:..:.||.|||:..:.|..|
RBAM_027230       49 RRLLHSLFFVAEEEGRVLGFANATPV---QKDGNAELTAIYIDPDCQGSG     95

BSNT_04558___    100 AGRALLAKGAEYLLQH-GFSSMFVWVIEQNP-SIIFYQAYSPERVAEDNF    147
                     .|.|||   .|.:.|. |...::|...::|. ::.||||...:.|.|...
RBAM_027230       96 IGTALL---KECIRQSGGVKKLYVHAEKENRIALSFYQAKGFQWVCEFEE    142

BSNT_04558___    148 EIAGVRLKEVGLGWPDLSALKTLLNR    173
                     :..|..|:.|          |.:||.
RBAM_027230      143 DFKGHTLQTV----------KLVLNI    158


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