Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04407 and RBAM_027190
See
DNA alignment /
Visit
BSNT_04407 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:52
# Commandline: needle
# -asequence pep-align/BSNT_04407___msmE.1.9828.seq
# -bsequence pep-align/RBAM_027190___msmE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04407___msmE-RBAM_027190___msmE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04407___msmE-RBAM_027190___msmE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04407___msmE
# 2: RBAM_027190___msmE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 426
# Identity: 316/426 (74.2%)
# Similarity: 368/426 (86.4%)
# Gaps: 1/426 ( 0.2%)
# Score: 1720.0
#
#
#=======================================
BSNT_04407___ 1 MKHTFVLFLSLILLVLPGCSAEKSSADTAKKTLTIYSTMSTDSERDTFRK 50
||....||||...::|.|||||:|.|...:||||:|||:|:||||..|||
RBAM_027190__ 1 MKRLLALFLSFTCMILTGCSAEQSGAGEKQKTLTVYSTISSDSERAVFRK 50
BSNT_04407___ 51 LAAAFEKEHSDIHVSLHFPGNDYENMMRVRMAANDLPDLFDTHGWGKIRY 100
||.:|:|||.||.|::|||||||||||||||||.|:|||||||||.||||
RBAM_027190__ 51 LADSFQKEHPDIQVNVHFPGNDYENMMRVRMAAGDMPDLFDTHGWAKIRY 100
BSNT_04407___ 101 GEYTADLRDMEWTQDLDPNLNSILKNKSGKVYAYPINQAKDGLAYNRNIL 150
|||||||..|.||:.|||||||:||:..|::||:|:|||||||||||.:|
RBAM_027190__ 101 GEYTADLSGMSWTKRLDPNLNSMLKDAKGRIYAFPLNQAKDGLAYNRTLL 150
BSNT_04407___ 151 DRYGIAPPETMDDFIKALRTIKEKSKGSIVPFWFAGYDKSSFAQYYDQFA 200
::|||.||||||||:||||.|||||.|:::|||||||:||||||||||||
RBAM_027190__ 151 EKYGIKPPETMDDFMKALRQIKEKSGGTVIPFWFAGYEKSSFAQYYDQFA 200
BSNT_04407___ 201 TPLLITDPAHNEKKQLINGTFQWNKFTCLSKILKQMQKEKLINIDAVTAK 250
.|||||||||..||||:||||:|..||.||..||:||||.|:||||||||
RBAM_027190__ 201 APLLITDPAHRYKKQLLNGTFRWTHFTYLSDKLKEMQKENLLNIDAVTAK 250
BSNT_04407___ 251 KSQLIELMAQNKIAFTMQGGTLGQDVAQINSNVEVGIIPTPAIHPGDDPI 300
:|||||||||||||||:|||||||||||||..|:||||||||:|.||.|:
RBAM_027190__ 251 RSQLIELMAQNKIAFTLQGGTLGQDVAQINPKVKVGIIPTPAVHKGDAPV 300
BSNT_04407___ 301 WIGGERYTLAAWKDSSQLKEAKEFIAFMARPANAKQMAEATSLPSGLTNV 350
|||||||||||:|||.:|:|||:||||||||.:||.:|||||||:||.||
RBAM_027190__ 301 WIGGERYTLAAFKDSPRLEEAKQFIAFMARPEHAKSIAEATSLPAGLVNV 350
BSNT_04407___ 351 KADIFYANDYEHYQDVKVEPYFDRLYLPNGMWDVLGTVGQELAADILAPQ 400
:.||||||||:.||.:||:|||||||||||||||:||.||||.||||.|.
RBAM_027190__ 351 QTDIFYANDYKRYQHIKVQPYFDRLYLPNGMWDVMGTAGQELMADILTPA 400
BSNT_04407___ 401 DISQKLGREYKRLREQSETQGAENNE 426
:||.||||||||||.||:::|||..
RBAM_027190__ 401 EISAKLGREYKRLRLQSDSRGAEKE- 425
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.