Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04379 and RBAM_027160
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:51
# Commandline: needle
# -asequence pep-align/BSNT_04379.1.9828.seq
# -bsequence pep-align/RBAM_027160___opuD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04379-RBAM_027160___opuD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04379-RBAM_027160___opuD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04379
# 2: RBAM_027160___opuD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 511
# Identity: 192/511 (37.6%)
# Similarity: 202/511 (39.5%)
# Gaps: 295/511 (57.7%)
# Score: 997.0
#
#
#=======================================
BSNT_04379 1 MLKHISSVFWIVIAITAAAVLWGVISPDSLQNVSQSAQAFITDSFGWYYL 50
|.|:|||||||||.|||||||||.|||||||.|:.:||.|||||||||||
RBAM_027160__ 1 MKKNISSVFWIVIVITAAAVLWGAISPDSLQQVTDTAQKFITDSFGWYYL 50
BSNT_04379 51 LVVSLFVGFCLFLIFSPIGKIKLGKPDEKPEFGLLSWFAMLFSAGMGIGL 100
||||:|||||||||.||||.||||||.|||||||||||||||||||||||
RBAM_027160__ 51 LVVSIFVGFCLFLIVSPIGTIKLGKPGEKPEFGLLSWFAMLFSAGMGIGL 100
BSNT_04379 101 VFYGAAEPISHYAISSPSGETETPQAFRDALRYTFFHWGLHAWAIYAIVA 150
|||||||||||||||||||||||||||||||||||||||||||||||:||
RBAM_027160__ 101 VFYGAAEPISHYAISSPSGETETPQAFRDALRYTFFHWGLHAWAIYAVVA 150
BSNT_04379 151 LCIAYFQFRKGAPGLISSTLSPILGDKVNGPIGKAIDCIAVFATVVGVST 200
||||||||||.|||||||||:|:|||||||||||||||||||||||||:|
RBAM_027160__ 151 LCIAYFQFRKDAPGLISSTLTPLLGDKVNGPIGKAIDCIAVFATVVGVAT 200
BSNT_04379 201 SLGLGATQXQ---------PKLTAV------------------------- 216
|||||||| . ||..::
RBAM_027160__ 201 SLGLGATQINGGLHYLFGIPKTFSIQLILIAVVTVLFLISAWSGIGKGIK 250
BSNT_04379 216 -------------------------------------------------- 216
RBAM_027160__ 251 YLSNTNMALAAILMIFMLIAGPTVLIMNSFTDSIGQYIQNIVQMSFRLSP 300
BSNT_04379 216 -------------------------------------------------- 216
RBAM_027160__ 301 NDPQKREWINSWTIFYWAWWISWSPFVGIFIARVSRGRTIREFLIGVLVT 350
BSNT_04379 216 -------------------------------------------------- 216
RBAM_027160__ 351 PCILAFLWFAIFGVSAMDLQQKGVFNVAGMSTDTMLFGALSHYPLTMVTS 400
BSNT_04379 216 -------------------------------------------------- 216
RBAM_027160__ 401 VLTLVLIAVFFITSADSATFVLGMQTSYGSLDPSNRVKIIWGVIQSAVAA 450
BSNT_04379 216 -------------------------------------------------- 216
RBAM_027160__ 451 VLLYSGGLAALQNTAILAAVPFSVVILLMIVSLYKSLASERKGIKQAEKY 500
BSNT_04379 216 ----------- 216
RBAM_027160__ 501 QKPRSPRVKKA 511
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