Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04377 and RBAM_027140
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:51
# Commandline: needle
# -asequence pep-align/BSNT_04377___ytgP.1.9828.seq
# -bsequence pep-align/RBAM_027140___ytgP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04377___ytgP-RBAM_027140___ytgP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04377___ytgP-RBAM_027140___ytgP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04377___ytgP
# 2: RBAM_027140___ytgP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 545
# Identity: 460/545 (84.4%)
# Similarity: 500/545 (91.7%)
# Gaps: 1/545 ( 0.2%)
# Score: 2358.0
#
#
#=======================================
BSNT_04377___ 1 MSSKLLRGTFVLTLGTYISRILGMVYLIPFSIMVGATGGALFQYGYNQYT 50
||||||||||||||||||||||||:|||||..||||||||||||||||||
RBAM_027140__ 1 MSSKLLRGTFVLTLGTYISRILGMIYLIPFGAMVGATGGALFQYGYNQYT 50
BSNT_04377___ 51 LFLNIATMGFPAAVSKFVSKYNSKGDYETSRKMLKAGMSVMLVTGMIAFF 100
|||||||||||||||||||||||||||||||:||:||||||||||||||.
RBAM_027140__ 51 LFLNIATMGFPAAVSKFVSKYNSKGDYETSRRMLRAGMSVMLVTGMIAFS 100
BSNT_04377___ 101 ILYLSAPMFAEISLGGKDNNGLTIDHVVYVIRMVSLALLVVPIMSLVRGF 150
|||:|||.|||.||||..||||||||||||||||||||||||||||||||
RBAM_027140__ 101 ILYISAPFFAETSLGGTSNNGLTIDHVVYVIRMVSLALLVVPIMSLVRGF 150
BSNT_04377___ 151 FQGHQMMGPTAVSQVVEQIVRIIFLLSATFLILKVFNGGLVIAVGYATFA 200
||||||||||||||||||:.||||||.||:|||:|.||||||||||||||
RBAM_027140__ 151 FQGHQMMGPTAVSQVVEQLARIIFLLGATYLILRVINGGLVIAVGYATFA 200
BSNT_04377___ 201 ALIGAFGGLVVLYIYWNKRKGSLLAMMPNTGPTANLSYKKMFFELFSYAA 250
||||:||||||||||||||||.||||.||..|:|||||||||.|||||||
RBAM_027140__ 201 ALIGSFGGLVVLYIYWNKRKGDLLAMKPNLVPSANLSYKKMFIELFSYAA 250
BSNT_04377___ 251 PYVFVGLAIPLYNYIDTNTFNKAMIEAGHQAISQDMLAILTLYVQKLVMI 300
||||||||||||:||||||||||||.|||:.||||||||:||||.|||||
RBAM_027140__ 251 PYVFVGLAIPLYSYIDTNTFNKAMIAAGHKDISQDMLAIVTLYVPKLVMI 300
BSNT_04377___ 301 PVSLATAFGLTLIPTITESFTSGNYKLLNQQINQTMQTILFLIIPAVVGI 350
||||||||||||||||||||||.||||||||||||||.||||:||||||:
RBAM_027140__ 301 PVSLATAFGLTLIPTITESFTSRNYKLLNQQINQTMQIILFLVIPAVVGM 350
BSNT_04377___ 351 SLLSGPTYTFFYGSESLHPELGANILLWYSPVAILFSLFTVNAAILQGIN 400
|:||||.||||||||||.|::|.:||.||:||||||||||||||||||||
RBAM_027140__ 351 SVLSGPAYTFFYGSESLRPDIGQDILFWYAPVAILFSLFTVNAAILQGIN 400
BSNT_04377___ 401 KQKFAVVSLVIGVVIKLVLNVPLIKLMQADGAILATALGYIASLLYGFIM 450
|||||||||.|||:||:|||:|||||.|.|||||||||||||||||||||
RBAM_027140__ 401 KQKFAVVSLFIGVIIKVVLNMPLIKLFQGDGAILATALGYIASLLYGFIM 450
BSNT_04377___ 451 IKRHAGYSYKILVKRTVLMLVLSAIMGIAVKIVQWVLGFFISYQDGQLQA 500
|||||||||.:|:||.:|:.|||.:||:|||:.||:|.||::||.||:.|
RBAM_027140__ 451 IKRHAGYSYTVLIKRVILIAVLSVLMGVAVKLTQWLLSFFVTYQSGQVHA 500
BSNT_04377___ 501 AIVVVIAAAVGGAVYLYCGYRLGFLQKILGRRLPGFLRKGRHAG- 544
||||.:.||||||||::..||:|||||:.|.|||..||:|||:.
RBAM_027140__ 501 AIVVFVCAAVGGAVYMFAAYRIGFLQKMFGNRLPRVLRRGRHSAH 545
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