Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04372 and RBAM_027110

See DNA alignment / Visit BSNT_04372 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:50
# Commandline: needle
#    -asequence pep-align/BSNT_04372___ythP.1.9828.seq
#    -bsequence pep-align/RBAM_027110___ythP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04372___ythP-RBAM_027110___ythP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04372___ythP-RBAM_027110___ythP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04372___ythP
# 2: RBAM_027110___ythP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 236
# Identity:     164/236 (69.5%)
# Similarity:   191/236 (80.9%)
# Gaps:           2/236 ( 0.8%)
# Score: 845.5
# 
#
#=======================================

BSNT_04372___      1 MTNLLEASIEQAGYTSRKKVLTDVFLEVRKGELVGLIGANGAGKSTAIKA     50
                     |..||.|:|..|||..|.||::||.|.|..||:.||||||||||||.|||
RBAM_027110__      1 MGELLNANIVCAGYADRPKVISDVSLSVNAGEITGLIGANGAGKSTVIKA     50

BSNT_04372___     51 ILGLSEDFKGHIAWNDCSFAYIPEHPSFYEELTLWEHLDLISTLHGIEGR    100
                     :||||.|.:|.|.|||.|:|||||.||||:||||||||:|..:|.||||.
RBAM_027110__     51 VLGLSRDIEGGIEWNDSSYAYIPERPSFYDELTLWEHLELTGSLRGIEGE    100

BSNT_04372___    101 EFVHRAQSLLQTFSLDHVKHELPVTFSKGMQQKLMLIQAFLSKPDMYVID    150
                     |...||..||:.|||..|||:||..||||||||||||||||:|||:|:||
RBAM_027110__    101 ECRERAGRLLEEFSLTSVKHDLPSGFSKGMQQKLMLIQAFLAKPDIYIID    150

BSNT_04372___    151 EPFIGLDPISTKRFVDMLKAEKERGAGILMCTHVLDTAEKICDRFYMIEK    200
                     ||||||||||||.|.|||.|||||||||||||||||||||||||||::::
RBAM_027110__    151 EPFIGLDPISTKLFTDMLIAEKERGAGILMCTHVLDTAEKICDRFYLLDQ    200

BSNT_04372___    201 GSLFLQGTLKDIQDKTGLEGQSLLDCFYKAVQGDRL    236
                     |:|.|||||:::|:|||  .:|||||||.||:..:.
RBAM_027110__    201 GALLLQGTLEELQEKTG--SRSLLDCFYSAVRSSQR    234


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