Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04368 and RBAM_027070

See DNA alignment / Visit BSNT_04368 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:50
# Commandline: needle
#    -asequence pep-align/BSNT_04368___ytkP.1.9828.seq
#    -bsequence pep-align/RBAM_027070___ytkP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04368___ytkP-RBAM_027070___ytkP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04368___ytkP-RBAM_027070___ytkP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04368___ytkP
# 2: RBAM_027070___ytkP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 311
# Identity:     267/311 (85.9%)
# Similarity:   290/311 (93.2%)
# Gaps:           1/311 ( 0.3%)
# Score: 1375.0
# 
#
#=======================================

BSNT_04368___      1 MLKIVANTADLIGDTPLVRLNRLQPENAAQVYLKLEFFNPSGSVKDRAAY     50
                      :|||.:||:|||.||:|:|||||||:|||||||||.|||||||||||||
RBAM_027070__      1 -MKIVNSTAELIGGTPIVKLNRLQPEHAAQVYLKLESFNPSGSVKDRAAY     49

BSNT_04368___     51 QMIIEAEQNGLLKPGSVIIEPTSGNTGIGLAMNAAARGYKAILVMPDTMT    100
                     .||||||.:|.|||||||||||||||||||||||||||||||||||||||
RBAM_027070__     50 NMIIEAENSGHLKPGSVIIEPTSGNTGIGLAMNAAARGYKAILVMPDTMT     99

BSNT_04368___    101 KERINLLKAYGAEVVLTPGEERMPGSIKKAKELAEQIPNSYIPMQFDNTA    150
                     |||||||||||||||||||.||||||||||||||||||.|:|||||||.|
RBAM_027070__    100 KERINLLKAYGAEVVLTPGAERMPGSIKKAKELAEQIPGSFIPMQFDNGA    149

BSNT_04368___    151 NPDAHRKTTAPEIARAIEEIGKPLGAFVASSGTGGTITGTGEALKELFPD    200
                     ||||||||||.||.:|::::.:|||||||::|||||||||||.|||||||
RBAM_027070__    150 NPDAHRKTTAIEIYQAVQQLNRPLGAFVATAGTGGTITGTGETLKELFPD    199

BSNT_04368___    201 ITVHVVEPAGSPVLSGGKPGAHKLVGTSPGFIPPILNEDVYDEIIKISDE    250
                     :.|||.|||||||||||||||||||||||||||.|||:||||||:|||||
RBAM_027070__    200 MIVHVAEPAGSPVLSGGKPGAHKLVGTSPGFIPGILNQDVYDEIMKISDE    249

BSNT_04368___    251 DAYTTTRRLAAEEGILVGPSSGAACFAAIETAKRLSPDKVVVCMTADTGE    300
                     ||||||||||.||||||||||||||||||||||||..:::|:||||||||
RBAM_027070__    250 DAYTTTRRLAREEGILVGPSSGAACFAAIETAKRLPSEQIVICMTADTGE    299

BSNT_04368___    301 RYLSTDLWSFI    311
                     ||||||||||.
RBAM_027070__    300 RYLSTDLWSFE    310


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