Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04367 and RBAM_027060
See
DNA alignment /
Visit
BSNT_04367 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:50
# Commandline: needle
# -asequence pep-align/BSNT_04367___ytlP.1.9828.seq
# -bsequence pep-align/RBAM_027060___ytlP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04367___ytlP-RBAM_027060___ytlP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04367___ytlP-RBAM_027060___ytlP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04367___ytlP
# 2: RBAM_027060___ytlP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 183
# Identity: 121/183 (66.1%)
# Similarity: 145/183 (79.2%)
# Gaps: 0/183 ( 0.0%)
# Score: 658.0
#
#
#=======================================
BSNT_04367___ 1 MPDIRPHYFIGVPIPEGIANPIYQAAKNEPILTFQKWVHPLDYHITLIFL 50
|....||||||:|||..||.||::|||.||.|:|:|||||.|||||||||
RBAM_027060__ 1 MKASLPHYFIGIPIPADIAEPIWEAAKKEPALSFKKWVHPHDYHITLIFL 50
BSNT_04367___ 51 GAADETQIKKLEGSLAEIASEIDPFSIEFDKIDVFGDRRRPRVLHLEPKK 100
|||||.::.||...||:.||...||:::|..:|:|||||:||||||||::
RBAM_027060__ 51 GAADEERLAKLSSLLADAASAAQPFTVQFQHLDIFGDRRQPRVLHLEPER 100
BSNT_04367___ 101 NKTLDRLREHTKQAVLQAGFQVEKRPYHPHMTLARKWTGENGFPAHVPFE 150
|:.|..|||.||||||:|||||||||||||||:||||.|:..||..||||
RBAM_027060__ 101 NELLFDLREKTKQAVLKAGFQVEKRPYHPHMTMARKWAGDRPFPDDVPFE 150
BSNT_04367___ 151 SGEVSMMAERFSLFQIHLNQSPKYEEIFKFQLS 183
||.|.....||||||.||::|||||||.:|||:
RBAM_027060__ 151 SGRVQSAVSRFSLFQTHLDRSPKYEEIAQFQLT 183
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.