Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04366 and RBAM_027050

See DNA alignment / Visit BSNT_04366 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:50
# Commandline: needle
#    -asequence pep-align/BSNT_04366___ytlQ.1.9828.seq
#    -bsequence pep-align/RBAM_027050___ytlQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04366___ytlQ-RBAM_027050___ytlQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04366___ytlQ-RBAM_027050___ytlQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04366___ytlQ
# 2: RBAM_027050___ytlQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 310
# Identity:     217/310 (70.0%)
# Similarity:   260/310 (83.9%)
# Gaps:           6/310 ( 1.9%)
# Score: 1123.0
# 
#
#=======================================

BSNT_04366___      1 MAQIIKIHDYISRYELDPYHYINQFVRLKKERWLSLVEAAERQHEERQ--     48
                     |||||||||.|||||||||||:|||:|||||||.:|:||.:|:.||::  
RBAM_027050__      1 MAQIIKIHDCISRYELDPYHYMNQFIRLKKERWETLLEAFDRKTEEKETK     50

BSNT_04366___     49 -ASAEEPEPVQKRKKFSLKRRKEEIKADIQEERHQWF---EDEEDIHVRL     94
                      |:..|.:....|||||||:||||..|||.|:|||||   |.||.:...|
RBAM_027050__     51 TAAGGETDQAPARKKFSLKKRKEENTADINEKRHQWFDEPEGEEALFGNL    100

BSNT_04366___     95 PKSRVALASFYKRHLYDFQLKWASSTLSEISQLSNQVKQDRILRYLTQQL    144
                     |..:..||.|:|..||||||||||||||:.|:||..||:||:|:.|.|:|
RBAM_027050__    101 PSQKSELAPFFKDQLYDFQLKWASSTLSQKSELSQAVKRDRMLKMLAQKL    150

BSNT_04366___    145 PDSYFIMYKPVLKIQQAAVELSIVIISPLEIYCVSFLEAEEDSVYIGSKN    194
                     |||||:||.|||:||||:||||::|||||||:|.:|:||||||||||||:
RBAM_027050__    151 PDSYFVMYHPVLQIQQASVELSMIIISPLEIFCAAFMEAEEDSVYIGSKH    200

BSNT_04366___    195 RFWDKKTASQTASVLNPGLSLFRTDSVVSKIVKEKQAEIPVRKLLLSRTS    244
                     |||:::.:..|..||||.|||.||.||||:|||||||:||||||||||||
RBAM_027050__    201 RFWEERGSGSTRQVLNPSLSLHRTGSVVSQIVKEKQADIPVRKLLLSRTS    250

BSNT_04366___    245 YIDYPEPPYGLEIADKRSAEEWIERQKKNTAPIKHHQVKAAKALLSYCMS    294
                     |||||||||||||||||:|.||:|:|:||||||||||:|||||||||.:|
RBAM_027050__    251 YIDYPEPPYGLEIADKRTAAEWVEKQQKNTAPIKHHQLKAAKALLSYGLS    300

BSNT_04366___    295 DSYRRQEWLE    304
                     ||.||||||:
RBAM_027050__    301 DSSRRQEWLD    310


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