Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04366 and RBAM_027050
See
Amino acid alignment /
Visit
BSNT_04366 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:50
# Commandline: needle
# -asequence dna-align/BSNT_04366___ytlQ.1.9828.seq
# -bsequence dna-align/RBAM_027050___ytlQ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04366___ytlQ-RBAM_027050___ytlQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04366___ytlQ-RBAM_027050___ytlQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04366___ytlQ
# 2: RBAM_027050___ytlQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 995
# Identity: 665/995 (66.8%)
# Similarity: 665/995 (66.8%)
# Gaps: 142/995 (14.3%)
# Score: 2236.0
#
#
#=======================================
BSNT_04366___ 1 ATGGCACAAATCATCAAAATTCATGATTATATATCAAGATATGAGCTTGA 50
||||||||.||||||||||||||.||.|..|||||.||||||||.|||||
RBAM_027050__ 1 ATGGCACAGATCATCAAAATTCACGACTGCATATCCAGATATGAACTTGA 50
BSNT_04366___ 51 TCCGTACCATTATATCAACCAGTTTGTACGTCTGAAAAAAGAGCGCTGGC 100
|||.||.||||||||.|||||||||.|.||.|||||.|||||.||||||.
RBAM_027050__ 51 TCCATATCATTATATGAACCAGTTTATCCGGCTGAAGAAAGAACGCTGGG 100
BSNT_04366___ 101 TTTCACTAGTAGAAGC-----AGCGGAACGACAGCATGAAGAAAGGCAAG 145
...|.||..|.||||| |.||||| ||| .|||||||
RBAM_027050__ 101 AGACGCTTCTTGAAGCGTTTGACCGGAA-GAC----GGAAGAAA------ 139
BSNT_04366___ 146 CCAGTGCTGAAGAACCGGAA-------CCGGTGCAGAAAC---------- 178
|||||.||.|| ||||.|..|||||
RBAM_027050__ 140 ---------AAGAAACGAAAACGGCTGCCGGCGGGGAAACCGATCAAGCG 180
BSNT_04366___ 179 -------GAAAAAAATTTTCATTGAAAAGAAGAAAAGAAGAGATAAAA-- 219
|.|||||||||||.||.||||..|||||||||| ||||
RBAM_027050__ 181 CCGGCCAGGAAAAAATTTTCCTTAAAAAAGAGAAAAGAAG----AAAATA 226
BSNT_04366___ 220 --GCCGATATACAAGAAGAGAGACACCAATGGTTTGA------GGACGAA 261
|||||||||.|.|||.||||.|||||||||||||| |||.|.|
RBAM_027050__ 227 CGGCCGATATAAATGAAAAGAGGCACCAATGGTTTGATGAGCCGGAGGGA 276
BSNT_04366___ 262 GAAGA-----TATTC----ATGT----------AAGGCTCCCGAAGAGCA 292
||||| |.||| ||.| |||.|| ||||
RBAM_027050__ 277 GAAGAGGCGCTGTTCGGGAATCTTCCGTCTCAAAAGTCT------GAGC- 319
BSNT_04366___ 293 GGGTGGCGCTTGCTTCTTTTTATAAAAGA-CATTTATATGATTTTCAGCT 341
|.|||| |||||| |.||||| ||..|.|||||.|||||..|
RBAM_027050__ 320 ---TCGCGC------CTTTTT-TCAAAGATCAGCTGTATGACTTTCAATT 359
BSNT_04366___ 342 CAAATGGGCAAGCTCTACTCTTTCAGAAATATCTCAACTCTCAAACCAGG 391
.||||||||.|||||.||.|||||..|||..|||.|.||.|| .||||
RBAM_027050__ 360 AAAATGGGCGAGCTCCACGCTTTCTCAAAAGTCTGAGCTTTC---GCAGG 406
BSNT_04366___ 392 TG-----AAGCAGGACCGCATTTTGCGTTA-----TCTGACCCAGCAGCT 431
.| ||| ||||.|.|| |||| .|||.|.||..||||
RBAM_027050__ 407 CGGTCAAAAG--GGACAGGAT-----GTTAAAAATGCTGGCTCAAAAGCT 449
BSNT_04366___ 432 GCCTGATTCTTATTTTATTATGTATAAGCCTGTGCTGAAAATTCAGCAGG 481
|||.|||||.||||||.|.||||||.|.||.||.||..||||||||||||
RBAM_027050__ 450 GCCCGATTCCTATTTTGTGATGTATCATCCGGTTCTTCAAATTCAGCAGG 499
BSNT_04366___ 482 CGGCGGTTGAATTAAGCATTGTGATTATTTCTCCTCTGGAAATTTATTGC 531
||.|.||.|||.|.|||||..|.||.||.||.||.|||||.||||..|||
RBAM_027050__ 500 CGTCCGTCGAACTGAGCATGATCATCATCTCGCCGCTGGAGATTTTCTGC 549
BSNT_04366___ 532 GTTTCTTTTTTAGAGGCTGAGGAAGACAGTGTCTACATAGGGTCTAAAAA 581
|.|.|||||.|.||.||.||.||.|||||.||.||.||.||.||.|||.|
RBAM_027050__ 550 GCTGCTTTTATGGAAGCGGAAGAGGACAGCGTATATATCGGATCAAAACA 599
BSNT_04366___ 582 TCGTTTTTGGGACAAGAAAACAGCCTCTCAGACTGCATC--------AGT 623
.|||||||||| ||| |||.||.||| |.|||.| |||
RBAM_027050__ 600 CCGTTTTTGGG--AAG-AAAGAGGCTC-----CGGCAGCACGCGCCAAGT 641
BSNT_04366___ 624 GTTAAATCCAGGGCTTAGCCTGTTTCGTACGGACTCGGTTGTGTCAAAGA 673
.||.|||||....||.||||||...||.||||.||||||.||.||..|.|
RBAM_027050__ 642 ATTGAATCCGTCTCTCAGCCTGCACCGGACGGGCTCGGTCGTTTCGCAAA 691
BSNT_04366___ 674 TCGTAAAGGAAAAACAGGCTGAGATTCCGGTTCGAAAATTGCTT---CTG 720
|||||||.|||||.|||||.||.|||||.||.||.|| |||| ||.
RBAM_027050__ 692 TCGTAAAAGAAAAGCAGGCCGACATTCCCGTGCGGAA---GCTTTTGCTC 738
BSNT_04366___ 721 AGCAGAACGTCGTACATCGATTACCCGGAGCCGCCATACGGCTTAGAAAT 770
|||||||||||.||.||.|||||.|||||||||||.|||||..|.|||||
RBAM_027050__ 739 AGCAGAACGTCTTATATTGATTATCCGGAGCCGCCGTACGGGCTGGAAAT 788
BSNT_04366___ 771 AGCGGATAAGCGGAGCGCGGAAGAATGGATTGAGCGGCAGAAGAAAAACA 820
|||.|||||.||||..||.|.|||.|||.|.||...||||.|||||||.|
RBAM_027050__ 789 AGCTGATAAACGGACTGCCGCAGAGTGGGTGGAAAAGCAGCAGAAAAATA 838
BSNT_04366___ 821 CTGCTCCGATCAAACATCATCAGGTAAAGGCTGCAAAGGCTCTATTGTCT 870
|.||.||||||||.||.||.|||.|.|||||.||.||||||||.||||||
RBAM_027050__ 839 CGGCGCCGATCAAGCACCACCAGCTGAAGGCGGCGAAGGCTCTTTTGTCT 888
BSNT_04366___ 871 TACTGCATGTCTGACTCCTATCGCAGACAGGAGTGGCTGGAGTAA 915
|||.||.||...||.||....||.||||||||.|||||.||.|||
RBAM_027050__ 889 TACGGCTTGAGCGATTCAAGCCGGAGACAGGAATGGCTTGATTAA 933
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.