Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04362 and RBAM_027030

See DNA alignment / Visit BSNT_04362 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:49
# Commandline: needle
#    -asequence pep-align/BSNT_04362___ytmP.1.9828.seq
#    -bsequence pep-align/RBAM_027030___ytmP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04362___ytmP-RBAM_027030___ytmP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04362___ytmP-RBAM_027030___ytmP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04362___ytmP
# 2: RBAM_027030___ytmP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 269
# Identity:     241/269 (89.6%)
# Similarity:   253/269 (94.1%)
# Gaps:           4/269 ( 1.5%)
# Score: 1305.0
# 
#
#=======================================

BSNT_04362___      1 ----MNWLGQLLGSDWEIFPAGGATGDAYYAKHNGQQLFLKRNSSPFLAV     46
                         ||||||||||||||||||||||||||||||||||||||||||||||
RBAM_027030__      1 MNIDMNWLGQLLGSDWEIFPAGGATGDAYYAKHNGQQLFLKRNSSPFLAV     50

BSNT_04362___     47 LSAEGIVPKLVWTKRMENGDVITAQHWMTGRELKPKDMSGRPVAELLRKI     96
                     ||||||||||||||||||||||||||||.|||||.|||||||||||||||
RBAM_027030__     51 LSAEGIVPKLVWTKRMENGDVITAQHWMAGRELKAKDMSGRPVAELLRKI    100

BSNT_04362___     97 HTSKALLDMLKRLGKEPLNPGALLSQLKQAVFAVQQSSPLIQEGIKYLEE    146
                     ||||||||||||||||||:|||||||||||||||:|.|||||||:.|||.
RBAM_027030__    101 HTSKALLDMLKRLGKEPLDPGALLSQLKQAVFAVRQFSPLIQEGLAYLEA    150

BSNT_04362___    147 HLHEVHFGEKVVCHCDVNHNNWLLSEDNQLYLIDWDGAMIADPAMDLGPL    196
                     |:.:|.||||||||||||||||||||||||||||||||||||||||||||
RBAM_027030__    151 HVDQVQFGEKVVCHCDVNHNNWLLSEDNQLYLIDWDGAMIADPAMDLGPL    200

BSNT_04362___    197 LYHYVEKPAWESWLSMYGIELTESLRLRMAWYVLSETITFIAWHKAKGND    246
                     ||||||:|||:|||.|||::|||.||||||||:||||||||||||:||||
RBAM_027030__    201 LYHYVEEPAWDSWLGMYGMKLTEGLRLRMAWYMLSETITFIAWHKSKGND    250

BSNT_04362___    247 KEFHDAMEELHILMKRIVD    265
                     |.:||||||||.||||||.
RBAM_027030__    251 KAYHDAMEELHALMKRIVK    269


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