Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04355 and RBAM_027000

See DNA alignment / Visit BSNT_04355 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:49
# Commandline: needle
#    -asequence pep-align/BSNT_04355___ytnP.1.9828.seq
#    -bsequence pep-align/RBAM_027000___ytnP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04355___ytnP-RBAM_027000___ytnP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04355___ytnP-RBAM_027000___ytnP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04355___ytnP
# 2: RBAM_027000___ytnP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 284
# Identity:     209/284 (73.6%)
# Similarity:   237/284 (83.5%)
# Gaps:           9/284 ( 3.2%)
# Score: 1124.0
# 
#
#=======================================

BSNT_04355___      1 METMKIGNITLTWLDGGVTHMDGGAMFGVVPKPLWSKKYPVNEKNQIELR     50
                     |||:.||||:||||||||||||||||||||||||||:|||||:|||||||
RBAM_027000__      1 METLNIGNISLTWLDGGVTHMDGGAMFGVVPKPLWSRKYPVNDKNQIELR     50

BSNT_04355___     51 TDPILIQKDGLNIIVDAGIGSGKLTDKQKRNYGVTQESNVKPSLAALGLT    100
                     ||||||:|:||||:||||||.||.:||||||||||||||:|.||..|||:
RBAM_027000__     51 TDPILIRKNGLNILVDAGIGRGKFSDKQKRNYGVTQESNLKQSLRDLGLS    100

BSNT_04355___    101 VADIDVIAMTHLHFDHACGLTEYEGERLVSVFPNAVIYTSAVEWDEMRHP    150
                     ..||.:.||||||||||||||||.||.||||||||.|.|||.||.|||:|
RBAM_027000__    101 CEDIHIAAMTHLHFDHACGLTEYSGEELVSVFPNARIITSATEWREMRNP    150

BSNT_04355___    151 NIRSKNTYWKENWEAVAGQVKTFEDTLTITEGITMHHTGGHSDGHSVLIC    200
                     |||||||||:||||||..||:|||:...:||||||||||||||||||::.
RBAM_027000__    151 NIRSKNTYWRENWEAVQDQVETFENEYQLTEGITMHHTGGHSDGHSVIVL    200

BSNT_04355___    201 EDAGETAVHMADLMPTHAHRNPLWVLAYDDYPMTSIPQKQKWQAFAAEKD    250
                     ||.||.|||.||||||:||:|||||||||||||||||:|||||.||||||
RBAM_027000__    201 EDGGEAAVHFADLMPTNAHKNPLWVLAYDDYPMTSIPEKQKWQTFAAEKD    250

BSNT_04355___    251 AGLFFIMMPNIARFNGMR-TEASKIQSSE-----    278
                     |.|.|.   :.|.:..:: .|..::.:|.     
RBAM_027000__    251 AWLIFY---HDAIYRAVKWGEDGEVAASVKREKK    281


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