Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04348 and RBAM_026960

See DNA alignment / Visit BSNT_04348 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:49
# Commandline: needle
#    -asequence pep-align/BSNT_04348___ytoQ.1.9828.seq
#    -bsequence pep-align/RBAM_026960___ytoQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04348___ytoQ-RBAM_026960___ytoQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04348___ytoQ-RBAM_026960___ytoQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04348___ytoQ
# 2: RBAM_026960___ytoQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 148
# Identity:     129/148 (87.2%)
# Similarity:   140/148 (94.6%)
# Gaps:           0/148 ( 0.0%)
# Score: 679.0
# 
#
#=======================================

BSNT_04348___      1 MEFIVYLAGEIHSNWREEIKEKTKSLKLPITFVGPMENHDRSDNIGEEIM     50
                     |:|:||||||||||||:|||:|..||.||||||||||||:||||||||||
RBAM_026960__      1 MQFVVYLAGEIHSNWRDEIKQKATSLDLPITFVGPMENHERSDNIGEEIM     50

BSNT_04348___     51 GVQPNAVLKDDKASDINNFRTAVLMNKADFVIALFGEKYKQWNTAMDASY    100
                     ||||::||||.:|||||||||.|||.||||||||||||||||||||||||
RBAM_026960__     51 GVQPDSVLKDARASDINNFRTEVLMEKADFVIALFGEKYKQWNTAMDASY    100

BSNT_04348___    101 AIAKGKPLIIIRPESLHHPLKELSNKANITVETVNQAIKALSYLFETE    148
                     |||||||||:|||:.|||||||||.||||||||||||:||||||||||
RBAM_026960__    101 AIAKGKPLILIRPKELHHPLKELSGKANITVETVNQAMKALSYLFETE    148


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