Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04345 and RBAM_026940

See DNA alignment / Visit BSNT_04345 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:48
# Commandline: needle
#    -asequence pep-align/BSNT_04345___ytpQ.1.9828.seq
#    -bsequence pep-align/RBAM_026940___ytpQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04345___ytpQ-RBAM_026940___ytpQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04345___ytpQ-RBAM_026940___ytpQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04345___ytpQ
# 2: RBAM_026940___ytpQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 269
# Identity:     240/269 (89.2%)
# Similarity:   257/269 (95.5%)
# Gaps:           0/269 ( 0.0%)
# Score: 1250.0
# 
#
#=======================================

BSNT_04345___      1 MKMTSRKLSDILKQRLQHENRSFLFDREKDTLRVEDQTTKKGITLDLPPI     50
                     ||||||||:|:||||||||||||.|||||||||||||||||||||:||||
RBAM_026940__      1 MKMTSRKLADLLKQRLQHENRSFFFDREKDTLRVEDQTTKKGITLELPPI     50

BSNT_04345___     51 IAKWELKKDEAIDEIVYYVSEAMTAMEGKAQEMTGKETRIYPVIRSTSFP    100
                     |||||.||:||||||||||||||.||||..|||:|||..|||||||||||
RBAM_026940__     51 IAKWETKKEEAIDEIVYYVSEAMEAMEGSGQEMSGKEAGIYPVIRSTSFP    100

BSNT_04345___    101 DKSSEDIPLIYDDHTAETRIYYALDLGKTYRLIDQRMLEKENWTKERIRE    150
                     |::|:.|||:||||||||||||||||||||||||.|||||||||||||||
RBAM_026940__    101 DQTSDGIPLVYDDHTAETRIYYALDLGKTYRLIDSRMLEKENWTKERIRE    150

BSNT_04345___    151 TAAFNLRSLPTVVKEDTVAGNYFYFFRANDGYDASRILNEAILNEYKQHA    200
                     ||:|||||||:|||:||||.|||||||||||||||||||::||:||||.|
RBAM_026940__    151 TASFNLRSLPSVVKQDTVADNYFYFFRANDGYDASRILNDSILHEYKQAA    200

BSNT_04345___    201 EGELAISVPHQDVLILADIRNESGYDILGQMSMSFFAGGTVPITALSFLY    250
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
RBAM_026940__    201 EGELAISVPHQDVLILADIRNESGYDILGQMSMSFFASGTVPITALSFLY    250

BSNT_04345___    251 NEGKLEPVFILAKSRPKKD    269
                     |||:||||||:||||||||
RBAM_026940__    251 NEGRLEPVFIMAKSRPKKD    269


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