Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04344 and RBAM_026930
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:48
# Commandline: needle
# -asequence pep-align/BSNT_04344___ytpR.1.9828.seq
# -bsequence pep-align/RBAM_026930___ytpR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04344___ytpR-RBAM_026930___ytpR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04344___ytpR-RBAM_026930___ytpR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04344___ytpR
# 2: RBAM_026930___ytpR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 201
# Identity: 176/201 (87.6%)
# Similarity: 189/201 (94.0%)
# Gaps: 0/201 ( 0.0%)
# Score: 910.0
#
#
#=======================================
BSNT_04344___ 1 MNAFYNKEGVGDTLLISLQDVTREQLGYEKHGDVVKIFNNETKETTGFNI 50
||||||||||||||||||:|..||::|||:.||||:|||.||||||||||
RBAM_026930__ 1 MNAFYNKEGVGDTLLISLKDAAREEIGYEREGDVVRIFNKETKETTGFNI 50
BSNT_04344___ 51 FNASSYLTIDENGPVALSETFVQDVNEILNRNGVEETLVVDLSPKFVVGY 100
||.||||.|::|||||||||||||||||||||||.|||.||||||||||:
RBAM_026930__ 51 FNVSSYLQIEDNGPVALSETFVQDVNEILNRNGVSETLTVDLSPKFVVGH 100
BSNT_04344___ 101 VESKEKHPNADKLSVCKVNVGEETLQIVCGAPNVDQGQKVVVAKVGAVMP 150
|||||||||||||::|:||||||||||||||||||:||||||||||||||
RBAM_026930__ 101 VESKEKHPNADKLNICQVNVGEETLQIVCGAPNVDKGQKVVVAKVGAVMP 150
BSNT_04344___ 151 SGLVIKDAELRGVPSSGMICSAKELDLPDAPAEKGILVLEGDYEAGDAFQ 200
|||||||||||||||||||||||||.||||||||||||||...|||:|||
RBAM_026930__ 151 SGLVIKDAELRGVPSSGMICSAKELALPDAPAEKGILVLEDSREAGEAFQ 200
BSNT_04344___ 201 F 201
|
RBAM_026930__ 201 F 201
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