Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04338 and RBAM_026900

See DNA alignment / Visit BSNT_04338 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:48
# Commandline: needle
#    -asequence pep-align/BSNT_04338___ytxG.1.9828.seq
#    -bsequence pep-align/RBAM_026900___ytxG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04338___ytxG-RBAM_026900___ytxG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04338___ytxG-RBAM_026900___ytxG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04338___ytxG
# 2: RBAM_026900___ytxG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 140
# Identity:     125/140 (89.3%)
# Similarity:   135/140 (96.4%)
# Gaps:           0/140 ( 0.0%)
# Score: 621.0
# 
#
#=======================================

BSNT_04338___      1 MIIILYLSVALIAVAFLVLVIYLSKTLKSLQLTLKNVASTLEGLEGQMKG     50
                     |||||||||||||||||:|||||||||||:|:||.||||||:||||||||
RBAM_026900__      1 MIIILYLSVALIAVAFLILVIYLSKTLKSVQMTLTNVASTLDGLEGQMKG     50

BSNT_04338___     51 ITTETAELLHKTNRLAEDIQEKSEKLNTVVHAVQGVGASVQQFNTSMKQA    100
                     ||.||.||||||||||||||||||||||||||||.||.||||||||:|||
RBAM_026900__     51 ITAETTELLHKTNRLAEDIQEKSEKLNTVVHAVQEVGTSVQQFNTSIKQA    100

BSNT_04338___    101 AGSVSASVRENQDKINQVVTWSQAAMEIWEKWKQKKKSAL    140
                     ||||:||||||||||:|||||||||||||:|||||||::|
RBAM_026900__    101 AGSVTASVRENQDKISQVVTWSQAAMEIWDKWKQKKKTSL    140


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