Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04338 and RBAM_026900
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:48
# Commandline: needle
# -asequence dna-align/BSNT_04338___ytxG.1.9828.seq
# -bsequence dna-align/RBAM_026900___ytxG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04338___ytxG-RBAM_026900___ytxG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04338___ytxG-RBAM_026900___ytxG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04338___ytxG
# 2: RBAM_026900___ytxG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 423
# Identity: 336/423 (79.4%)
# Similarity: 336/423 (79.4%)
# Gaps: 0/423 ( 0.0%)
# Score: 1332.0
#
#
#=======================================
BSNT_04338___ 1 ATGATTATTATTCTTTATTTGAGCGTTGCACTCATCGCAGTTGCATTTCT 50
|||||.||.||||||||.||.|||||.||||||||.||.|||||||||||
RBAM_026900__ 1 ATGATCATCATTCTTTACTTAAGCGTCGCACTCATTGCCGTTGCATTTCT 50
BSNT_04338___ 51 CGTATTAGTGATCTACTTGTCTAAAACACTGAAGTCATTGCAGCTGACAC 100
|.|..|.||.|||||..||||.||||||.|.|||||..|||||.||||..
RBAM_026900__ 51 CATCCTCGTCATCTATCTGTCCAAAACATTAAAGTCCGTGCAGATGACTT 100
BSNT_04338___ 101 TAAAAAACGTCGCATCCACTCTTGAAGGGCTGGAGGGACAAATGAAGGGC 150
|||.||||||.||.||.|||.|.||.||.||.||.||.||.|||||.|||
RBAM_026900__ 101 TAACAAACGTTGCCTCGACTTTAGACGGCCTTGAAGGGCAGATGAAAGGC 150
BSNT_04338___ 151 ATCACAACTGAAACAGCCGAGCTTTTACATAAGACCAACCGCCTGGCTGA 200
||.||..|.||.|||.|||||||.|||||||||||.|||||.||.||.||
RBAM_026900__ 151 ATTACCGCAGAGACAACCGAGCTGTTACATAAGACAAACCGTCTCGCGGA 200
BSNT_04338___ 201 AGATATTCAGGAAAAATCAGAAAAGCTGAATACGGTCGTTCATGCTGTTC 250
|||.|||||||||||||||||.||..|.||||||||.||.||||||||.|
RBAM_026900__ 201 AGACATTCAGGAAAAATCAGAGAAATTAAATACGGTTGTCCATGCTGTCC 250
BSNT_04338___ 251 AAGGAGTGGGAGCTTCTGTACAGCAGTTCAATACATCCATGAAACAAGCG 300
|.|.|||||||.||||.||.||||||||.|||||||||||.||.||.||.
RBAM_026900__ 251 AGGAAGTGGGAACTTCCGTCCAGCAGTTTAATACATCCATAAAGCAGGCA 300
BSNT_04338___ 301 GCAGGGTCTGTATCGGCATCAGTTAGAGAAAATCAAGATAAGATCAATCA 350
|||||.||.||..||||.||.||.|||||.|||||.||||||||||.|||
RBAM_026900__ 301 GCAGGTTCCGTTACGGCCTCTGTAAGAGAGAATCAGGATAAGATCAGTCA 350
BSNT_04338___ 351 AGTTGTCACATGGAGTCAAGCAGCAATGGAAATTTGGGAGAAATGGAAGC 400
.||||||||.|||||.||.||.||.||||||||.|||||.||.|||||||
RBAM_026900__ 351 GGTTGTCACCTGGAGCCAGGCCGCTATGGAAATATGGGACAAGTGGAAGC 400
BSNT_04338___ 401 AAAAGAAAAAATCAGCCCTGTAA 423
|||||||||||.||.|.||.|||
RBAM_026900__ 401 AAAAGAAAAAAACATCGCTTTAA 423
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