Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04335 and RBAM_026890

See DNA alignment / Visit BSNT_04335 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:48
# Commandline: needle
#    -asequence pep-align/BSNT_04335___ytxH.1.9828.seq
#    -bsequence pep-align/RBAM_026890___ytxH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04335___ytxH-RBAM_026890___ytxH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04335___ytxH-RBAM_026890___ytxH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04335___ytxH
# 2: RBAM_026890___ytxH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 152
# Identity:     109/152 (71.7%)
# Similarity:   123/152 (80.9%)
# Gaps:          15/152 ( 9.9%)
# Score: 526.5
# 
#
#=======================================

BSNT_04335___      1 MMSKDGINSKDFLIGTLIGGIIGATTALFLAPKSGKELRDDLGSQAVALR     50
                      |||||||||||||||||||||||||||||||||||||||||||||.||:
RBAM_026890__      1 -MSKDGINSKDFLIGTLIGGIIGATTALFLAPKSGKELRDDLGSQASALK     49

BSNT_04335___     51 DKTDKMTADAKEKGTQYVSIAKDKTSNITQLVADQSGQIMNKVKDLRDRS    100
                     ||||:|||||||||:|||||||||||||||||||||||||||||||:|||
RBAM_026890__     50 DKTDRMTADAKEKGSQYVSIAKDKTSNITQLVADQSGQIMNKVKDLKDRS     99

BSNT_04335___    101 KSDKTDSSTAMQDMREEAMQAADETKDQVLQTKEDVKDELKDAQKQAEQL    150
                     ||..|:.              |:||:.::..|.:.:|.|.:||.::|.|.
RBAM_026890__    100 KSTLTEK--------------AEETRSEMQDTAQSIKAEAEDAGEKAGQA    135

BSNT_04335___    151 NR    152
                     ||
RBAM_026890__    136 NR    137


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