Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04333 and RBAM_026880

See DNA alignment / Visit BSNT_04333 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:48
# Commandline: needle
#    -asequence pep-align/BSNT_04333___ytxJ.1.9828.seq
#    -bsequence pep-align/RBAM_026880___ytxJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04333___ytxJ-RBAM_026880___ytxJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04333___ytxJ-RBAM_026880___ytxJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04333___ytxJ
# 2: RBAM_026880___ytxJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 108
# Identity:      64/108 (59.3%)
# Similarity:    74/108 (68.5%)
# Gaps:          24/108 (22.2%)
# Score: 352.0
# 
#
#=======================================

BSNT_04333___      1 MAKQLIQSEEEFKRIAEQEGAFVFFKHSTTCPISQAAFHEFDAFANQHED     50
                     |.||||.||||||..||:|...||.|||||||||||||.||||||::|.:
RBAM_026880__      1 MTKQLISSEEEFKNAAEKENTLVFLKHSTTCPISQAAFQEFDAFASEHSE     50

BSNT_04333___     51 VPAYYLQVQEARPLSNFIAETYGVKHESPQIFIIQNGEVKWHTSHSQITE    100
                     ||:||||||::|||||:|||||||||||||:|:|                
RBAM_026880__     51 VPSYYLQVQDSRPLSNYIAETYGVKHESPQVFVI----------------     84

BSNT_04333___    101 AAIEQHLS    108
                             
RBAM_026880__     84 --------     84


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