Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04330 and RBAM_026850

See DNA alignment / Visit BSNT_04330 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:48
# Commandline: needle
#    -asequence pep-align/BSNT_04330___motP.1.9828.seq
#    -bsequence pep-align/RBAM_026850___ytxD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04330___motP-RBAM_026850___ytxD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04330___motP-RBAM_026850___ytxD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04330___motP
# 2: RBAM_026850___ytxD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 281
# Identity:     228/281 (81.1%)
# Similarity:   252/281 (89.7%)
# Gaps:          11/281 ( 3.9%)
# Score: 1173.5
# 
#
#=======================================

BSNT_04330___      1 MLFSWGEMMKRFDYLTPVGFVLGTIIIVIGIISGSGVSGFRSFLDLTSFF     50
                             ||||||||||||:||.||:.|||:||:|::|..||||||||.
RBAM_026850__      1 --------MKRFDYLTPVGFMLGCIIVAIGILSGTGLAGISSFLDLTSFL     42

BSNT_04330___     51 IVTGGLCAAVFISFPPSELKKAPSVLKQAFIRQEDNVKDLVKTFVSLSDH    100
                     ||||||.||:||||||.:|||.||||||.|.||:||||:||:.|||||:.
RBAM_026850__     43 IVTGGLAAAIFISFPPRDLKKTPSVLKQVFSRQDDNVKELVRVFVSLSEQ     92

BSNT_04330___    101 ARKHGLLSLDDQAREIKDPFLKKGLLLAIDGWDEETIRLVMDSEIAAMEE    150
                     ||:.||||||||||||||||||||||||||||||||||||||||||||||
RBAM_026850__     93 ARRQGLLSLDDQAREIKDPFLKKGLLLAIDGWDEETIRLVMDSEIAAMEE    142

BSNT_04330___    151 RHRKGRRVFEKAGEFAPAWGMIGTLVGLVLMLKNLNDPHMLGPNMAIALL    200
                     |||||||||||||:|||||||||||||||||||||||||.||||||:|||
RBAM_026850__    143 RHRKGRRVFEKAGDFAPAWGMIGTLVGLVLMLKNLNDPHTLGPNMAVALL    192

BSNT_04330___    201 TTLYGSLLANMVFNPIAAKLEEKTESEIFIKQVMVEGIIGVQSGKNPRNL    250
                     |||||:||||:||.||||||||||||||||||||:||::|:|||||||||
RBAM_026850__    193 TTLYGALLANLVFIPIAAKLEEKTESEIFIKQVMIEGVVGIQSGKNPRNL    242

BSNT_04330___    251 ESQLVVFSSREEWQK-QPKQVKTKKGSVHEA    280
                     |||||||||||:|:| ||  ...|||:||||
RBAM_026850__    243 ESQLVVFSSREDWRKGQP--ASKKKGAVHEA    271


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