Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03927 and RBAM_026760

See DNA alignment / Visit BSNT_03927 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:12
# Commandline: needle
#    -asequence pep-align/BSNT_03927___yrhO.1.9828.seq
#    -bsequence pep-align/RBAM_026760.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03927___yrhO-RBAM_026760.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03927___yrhO-RBAM_026760.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03927___yrhO
# 2: RBAM_026760
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 294
# Identity:      88/294 (29.9%)
# Similarity:   136/294 (46.3%)
# Gaps:          45/294 (15.3%)
# Score: 310.0
# 
#
#=======================================

BSNT_03927___      1 MKENMLDILKNL---NFTEYESKAYLALLQESPLTGYAVAKKSGVPRSKI     47
                         |.|:||.|   .|::||.|||:.||:.||:|||.::|:||||||.|
RBAM_026760        1 ----MEDVLKELQKFGFSQYECKAYIGLLKHSPVTGYEISKRSGVPRSMI     46

BSNT_03927___     48 YEVLESLVLRGDVFVSHGNTPQYVPVPAKELIKNRRLKAEEHFDQAEKYF     97
                     ||||..||.:|.|.:...:...|.|:..||||...|...|..|...|   
RBAM_026760       47 YEVLGKLVDKGAVHIVPSDPVTYAPLAGKELIDRLRHDFESSFGYLE---     93

BSNT_03927___     98 EKFEQTANDREN--IWNITGRSEILEKVKACILSAKKRILLEIWKEDFEE    145
                     ||.....:::|.  |..|:....::.::|..|..|::.:.|.:|::....
RBAM_026760       94 EKLLALESEQEMNVIRRISTNDHVINEMKDMIEKAEEELWLSVWEQQIPF    143

BSNT_03927___    146 I-EAELKQAAEQGVIVTIIAYGDIVSDFANVYLHDMSSEITEE-YDGRWL    193
                     | ||..|:||||..:.:|: :|.......|...|:||.|:.|: ..||..
RBAM_026760      144 IQEAANKRAAEQLPVFSIV-FGPPEVKLGNTTNHNMSPEVAEKRMGGRLT    192

BSNT_03927___    194 VYSGDDSEVVAGIVSLGNDSRAAWTMHVGLVMPITEVIIHDLYLME----    239
                     :.:.|:.||:....|...::.|..:....||:...|.:.|||...|    
RBAM_026760      193 IAARDNKEVLIANFSPQTNAWAIKSEDPALVLVAMEYMRHDLMFAELVKE    242

BSNT_03927___    240 --------ILKKHRELLEESFGKNLIQLRRKFSIHSDFKKHYLE    275
                             ::|::..|.....|...|                  
RBAM_026760      243 VGAEKVEGLMKQNHSLFHVVTGNRFI------------------    268


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