Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05812 and RBAM_026600

See DNA alignment / Visit BSNT_05812 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:19
# Commandline: needle
#    -asequence pep-align/BSNT_05812___ywdH.1.9828.seq
#    -bsequence pep-align/RBAM_026600___ywdH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05812___ywdH-RBAM_026600___ywdH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05812___ywdH-RBAM_026600___ywdH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05812___ywdH
# 2: RBAM_026600___ywdH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 456
# Identity:     429/456 (94.1%)
# Similarity:   444/456 (97.4%)
# Gaps:           0/456 ( 0.0%)
# Score: 2231.0
# 
#
#=======================================

BSNT_05812___      1 MNSIPSIISKHKAYFAAGHTRPLESRLNILRKLKQAVRTHEADLIAALYQ     50
                     |||||||:|||||||||||||.||||||:|:|||||::|.|||:.|||||
RBAM_026600__      1 MNSIPSIVSKHKAYFAAGHTRQLESRLNMLQKLKQAIKTQEADITAALYQ     50

BSNT_05812___     51 DLHKSEQEAYSTEIGIVLEEISFVMKRLRKWSKPKRVKTPLTHLGSKSII    100
                     ||||||||:|:|||||||||||||||||.||.||||||||||||||||||
RBAM_026600__     51 DLHKSEQESYTTEIGIVLEEISFVMKRLGKWVKPKRVKTPLTHLGSKSII    100

BSNT_05812___    101 IPEPYGTVLVIAPWNYPLQLALSPLIGAIAAGNTVVLKPSEYTPAVSAIL    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||:|
RBAM_026600__    101 IPEPYGTVLVIAPWNYPLQLALSPLIGAIAAGNTVVLKPSEYTPAVSAVL    150

BSNT_05812___    151 SKLISSVFPTDYVAMAEGGPDVSTALLQQPFDYIFFTGSVAVGKIVMEAA    200
                     |||||||||:||||||||||||||.|||||||||||||||||||||||||
RBAM_026600__    151 SKLISSVFPSDYVAMAEGGPDVSTVLLQQPFDYIFFTGSVAVGKIVMEAA    200

BSNT_05812___    201 AKQLIPVTLELGGKSPCIVHKDADIQLAAKRIVFGKFTNAGQTCIAPDYL    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_026600__    201 AKQLIPVTLELGGKSPCIVHKDADIQLAAKRIVFGKFTNAGQTCIAPDYL    250

BSNT_05812___    251 FVHEDIKTKLAEEMKRAIREFYGPQPERNPQYGKIVSERHYQRLLSFLND    300
                     |||:||||||.|||||||.||||||||:||||||||||||||||||||||
RBAM_026600__    251 FVHQDIKTKLTEEMKRAISEFYGPQPEQNPQYGKIVSERHYQRLLSFLND    300

BSNT_05812___    301 GIPLTGGQSDPDHHKIAPTILEQVRDDSPVMQEEIFGPILPLFTYRDIGE    350
                     ||||||||.:|||||||||||:||:||||||||||||||||||||.||.|
RBAM_026600__    301 GIPLTGGQFNPDHHKIAPTILDQVKDDSPVMQEEIFGPILPLFTYGDIDE    350

BSNT_05812___    351 VIEKVQSRPKPLALYLFTTNKETERAVLGNLSFGGGCVNDTLMHVATPYL    400
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
RBAM_026600__    351 VIEKVQSRPKPLALYLFTTNKETERAVLENLSFGGGCVNDTLMHVATPYL    400

BSNT_05812___    401 PFGGVGESGIGSYHGFDSFNTFTHKKSVVKQTNRFDFAFRYPSSKNGLRM    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_026600__    401 PFGGVGESGIGSYHGFDSFNTFTHKKSVVKQTNRFDFAFRYPSSKNGLRM    450

BSNT_05812___    451 IRKILK    456
                     ||||||
RBAM_026600__    451 IRKILK    456


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