Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04317 and RBAM_026580
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:46
# Commandline: needle
# -asequence pep-align/BSNT_04317___ytrP.1.9828.seq
# -bsequence pep-align/RBAM_026580___ytrP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04317___ytrP-RBAM_026580___ytrP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04317___ytrP-RBAM_026580___ytrP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04317___ytrP
# 2: RBAM_026580___ytrP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 582
# Identity: 369/582 (63.4%)
# Similarity: 467/582 (80.2%)
# Gaps: 3/582 ( 0.5%)
# Score: 1912.0
#
#
#=======================================
BSNT_04317___ 1 MVEQTKDQLSAFHYHMLDFLLTKSEKVTFTDSFIWLTSAIQTYFSTLCVS 50
|.:||.|:::|||..||.|.|||||.|:.:||.:||.||:::.|::|.::
RBAM_026580__ 1 MKKQTIDEVTAFHQKMLSFFLTKSESVSLSDSLLWLASALESCFTSLSLT 50
BSNT_04317___ 51 LTPSSSDFVTKQADGEARFSASKINASCYLIED-GSGRCFHLACRQDEEI 99
|:|:.|...|.:.:.|..::..|.:...::|.: .|||.|:|.......|
RBAM_026580__ 51 LSPAESTRFTIKTEDEPHYAPLKESDGRFMIRNQTSGRSFYLCSEGGLPI 100
BSNT_04317___ 100 PEGLPDVVASFLNQSMKQERLYNKTIYQKKIYKMTELFHSLLDQTDVLKQ 149
||.||::|..|:|||::|..|::||.:|:||::|||:|||||||.:||::
RBAM_026580__ 101 PESLPEIVTQFINQSVRQSGLFDKTKHQRKIHRMTEMFHSLLDQNEVLEK 150
BSNT_04317___ 150 LLESLTSTFSLFEFSLFISHDQDQCLGIPAKELYMEGEKSDSFALKVYLS 199
|..||::.|..|.|||||:.|||....:|||||:|:|:.:|..|||||||
RBAM_026580__ 151 LQASLSTAFRSFRFSLFITQDQDTDRQLPAKELHMDGKDADPSALKVYLS 200
BSNT_04317___ 200 GDILRKNESAAYIPIKGQQGTYGVLKAEGTGDSFLADACLDEMSMLANAA 249
|.:|||..|:||:|||||||||||||.||..|:.|:.:.|.||.:||.||
RBAM_026580__ 201 GRLLRKGRSSAYLPIKGQQGTYGVLKTEGLQDAVLSCSTLSEMLLLAGAA 250
BSNT_04317___ 250 GKAFENAQLYEQSKASIANLELINETSRRLNQRLTLTDTMNDLAVRMAES 299
||||||||||||||.|||||||||||||:|||||.|||||.:||..|.:|
RBAM_026580__ 251 GKAFENAQLYEQSKKSIANLELINETSRQLNQRLRLTDTMRELAAIMTQS 300
BSNT_04317___ 300 FQAEEVGFFHIDHFENLTLLPGSTAFFKEAKQSDFYNELKEKLYEGEKGV 349
|.||||.||||||||...||||.|||||..:.:.:.:.:||||:||||||
RBAM_026580__ 301 FHAEEVAFFHIDHFETQNLLPGHTAFFKTERANPYISIVKEKLFEGEKGV 350
BSNT_04317___ 350 FIGNGQSVFGKAGYGSLMAAPMIQNDRLLGFAVLLKQELYAFTFEMYKLF 399
|||:|::|||:.|:|||||.|||:||.:.|||:|||::||||||||||||
RBAM_026580__ 351 FIGSGKTVFGENGFGSLMAVPMIENDTVFGFAILLKKDLYAFTFEMYKLF 400
BSNT_04317___ 400 QALIHHATLAVTNSMLRDRLEHLVKTDQLTELFSRAYLDEKIQYSMKIHQ 449
||||||||||||||||||||||||:|||||||:||.|||||||||||||:
RBAM_026580__ 401 QALIHHATLAVTNSMLRDRLEHLVQTDQLTELYSRTYLDEKIQYSMKIHK 450
BSNT_04317___ 450 KGVFILVDIDNFKNVNDTYGHQTGDEILIQVASVIKSNIRKHDVGARWGG 499
:|||||||||||||:||||||||||.||||||:|:|::||:|||.|||||
RBAM_026580__ 451 RGVFILVDIDNFKNINDTYGHQTGDSILIQVATVMKNHIREHDVAARWGG 500
BSNT_04317___ 500 EELAIYLPNVPVAVGKRITERLVYAVRKNTKPEVTISCGISCWTTETKKS 549
||||:||||:.|:.|:||.:|||.|:|:||:|.||||||:|||:......
RBAM_026580__ 501 EELAVYLPNINVSSGERIAKRLVRAIRENTEPRVTISCGVSCWSKTGPMP 550
BSNT_04317___ 550 LKELVHEADEALYSAKRSGKNRLMIHDSIK-- 579
||.||.:||||||.|||:|||||:||.:..
RBAM_026580__ 551 LKLLVQQADEALYIAKRNGKNRLIIHQNSTTT 582
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