Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04316 and RBAM_026570

See DNA alignment / Visit BSNT_04316 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:46
# Commandline: needle
#    -asequence pep-align/BSNT_04316.1.9828.seq
#    -bsequence pep-align/RBAM_026570___ytsP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04316-RBAM_026570___ytsP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04316-RBAM_026570___ytsP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04316
# 2: RBAM_026570___ytsP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 163
# Identity:     140/163 (85.9%)
# Similarity:   149/163 (91.4%)
# Gaps:           3/163 ( 1.8%)
# Score: 733.5
# 
#
#=======================================

BSNT_04316         1 MFHVEKQSGDKEKDYQLLLKQLEAMTEDETDQIANYANASALLYHSLPEV     50
                     |||||||||||||.|||||||||||||||||.|||||||||||||||.||
RBAM_026570__      1 MFHVEKQSGDKEKSYQLLLKQLEAMTEDETDAIANYANASALLYHSLHEV     50

BSNT_04316        51 NWAGFYFAKEEDGQLVLGPFQGLPACVRIPFGRGVCGTAYANGKVERVED    100
                     ||||||||||  |:||||||||||||||||||||||||||:||.|:|:.|
RBAM_026570__     51 NWAGFYFAKE--GELVLGPFQGLPACVRIPFGRGVCGTAYSNGDVQRIAD     98

BSNT_04316       101 VNAFPGHIACDAASQSEIVLPIRVDGKIVGVLDIDSPVKNRFDEIDEKYL    150
                     ||||||||||||||||||||||||:|:::|||||||||||||||.||.||
RBAM_026570__     99 VNAFPGHIACDAASQSEIVLPIRVNGEVIGVLDIDSPVKNRFDETDETYL    148

BSNT_04316       151 TQFAETLEKALAQ    163
                     .:|.|||||.|. 
RBAM_026570__    149 AKFVETLEKRLG-    160


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