Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04316 and RBAM_026570
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:46
# Commandline: needle
# -asequence dna-align/BSNT_04316.1.9828.seq
# -bsequence dna-align/RBAM_026570___ytsP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04316-RBAM_026570___ytsP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04316-RBAM_026570___ytsP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04316
# 2: RBAM_026570___ytsP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 495
# Identity: 379/495 (76.6%)
# Similarity: 379/495 (76.6%)
# Gaps: 15/495 ( 3.0%)
# Score: 1426.5
#
#
#=======================================
BSNT_04316 1 ATGTTCCATGTCGAAAAACAATCTGGAGATAAAGAAAAAGACTATCAGCT 50
|||||.|||||||||||||||||.|||||||||||||||...||||||||
RBAM_026570__ 1 ATGTTTCATGTCGAAAAACAATCCGGAGATAAAGAAAAAAGTTATCAGCT 50
BSNT_04316 51 TCTGCTAAAACAGCTCGAAGCCATGACCGAAGACGAAACAGACCAAATAG 100
||||||.||||||||||||||||||||.|||||.|||||.||....||.|
RBAM_026570__ 51 TCTGCTTAAACAGCTCGAAGCCATGACAGAAGATGAAACGGATGCGATCG 100
BSNT_04316 101 CTAACTATGCAAATGCCTCAGCACTGCTGTATCATTCGCTGCCTGAAGTC 150
|.||.||.||.|||||.|||||.||..|.||.|||||..|.|.|||||||
RBAM_026570__ 101 CAAATTACGCGAATGCGTCAGCGCTTTTATACCATTCATTACATGAAGTC 150
BSNT_04316 151 AACTGGGCGGGTTTCTATTTTGCCAAAGAAGAGGATGGAC-AGCTTGTGT 199
|||||||||||.||.||.||.||.||||| ||.| ||||||||.
RBAM_026570__ 151 AACTGGGCGGGGTTTTACTTCGCTAAAGA-------GGGCGAGCTTGTGC 193
BSNT_04316 200 TAGGTCCGTTCCAAGGCCTCCCGGCATGTGTTCGGATTCCTTTCGGCAGA 249
|.||.|||||.|||||.||.||.||.|||||.||.|||||.|||||||||
RBAM_026570__ 194 TCGGACCGTTTCAAGGACTTCCTGCCTGTGTGCGCATTCCGTTCGGCAGA 243
BSNT_04316 250 GGGGTTTGCGGCACAGCGTACGCAAACGGAAAAGTGGAACGTGTTGAGGA 299
||.||.||||||||.||.|||.|.||.||..|.|||.|.||..|||..||
RBAM_026570__ 244 GGCGTATGCGGCACTGCCTACTCTAATGGCGACGTGCAGCGGATTGCCGA 293
BSNT_04316 300 TGTAAACGCGTTTCCTGGACATATCGCCTGCGATGCAGCGTCCCAATCAG 349
|||.||.|||||.||.||||||||||||||.||.||.||.|||||.||||
RBAM_026570__ 294 TGTGAATGCGTTCCCGGGACATATCGCCTGTGACGCGGCTTCCCAGTCAG 343
BSNT_04316 350 AAATTGTGCTTCCGATTCGTGTAGACGGAAAAATTGTCGGCGTCTTGGAC 399
||||.||.||.|||||.||.|||.||||..||.|..||||.||..|||||
RBAM_026570__ 344 AAATCGTCCTCCCGATCCGCGTAAACGGTGAAGTGATCGGTGTGCTGGAC 393
BSNT_04316 400 ATCGACAGCCCAGTGAAAAACCGTTTCGACGAAATTGATGAAAAATACTT 449
||.||||||||.||||||||||||||.||.||||..||.||||..||.||
RBAM_026570__ 394 ATTGACAGCCCCGTGAAAAACCGTTTTGATGAAACGGACGAAACCTATTT 443
BSNT_04316 450 AACTCAATTTGCCGAAACGCTAGAAAAAGCG-TTAGCGCAG-TAA 492
|.|..|.||||..||||||||.|||||| || |||| | |||
RBAM_026570__ 444 AGCAAAGTTTGTTGAAACGCTTGAAAAA-CGATTAG----GATAA 483
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